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The map label for this gene is ydeP [H]

Identifier: 225686678

GI number: 225686678

Start: 881257

End: 883569

Strand: Reverse

Name: ydeP [H]

Synonym: BMEA_B0901

Alternate gene names: 225686678

Gene position: 883569-881257 (Counterclockwise)

Preceding gene: 225686681

Following gene: 225686677

Centisome position: 74.53

GC content: 60.01

Gene sequence:

>2313_bases
ATGAGCAAGGGTAAAAAAACCGGTTTTATCGGCAAACGTTCCAGCGCGGCAGGCGGATGGGGTGCGCTGAAAAGCTGTGG
CCAGCAATTGCTGGCCAGCGGTGCACCGCTGGCTGGCGCCCGTGCGCTTTTGAAAGCCAATCAGCCGGATGGGTTCGATT
GTCCCGGTTGTGCATGGGGTGATCCCGAACATGGCTCGTCTTTTGAATTTTGTGAAAACGGCGTCAAGGCCGTTGCCTGG
GAGGCAACGGACCGGCGCACTACGCCTGCCTTTTTTCGCGAACACACGGTTTCCAAGCTTCGGGAATGGACGGATTACGA
TCTGGAAAATACGGGGCGCCTTACCCATCCCATGCGCTACAACACGGCAACGGACAAATATGAAGCCGTTGAATGGGATG
AGGCTTTTCAGGCTATCGGCGGCATTCTGAAGAGTTTCGACACGCCCGACCGGGTGGAATTCTATACGTCCGGCCGCGCT
TCCAATGAGGCGGCCTTTCTCTACCAGCTTTTCGTGCGCGCCTATGGCACGAACAATTTTCCCGATTGCTCCAATATGTG
CCACGAGGCAAGTGGCGTCGCGCTGACGCAATCCGTGGGTGTCGGCAAGGGCACGGTGCTGCTGGAGGATTTTGAACAGG
CCGATGCGATCTTCGTTGTAGGGCAAAATCCCGGCACCAATCATCCCCGCATGTTGGGCGATCTGCGCCGCGCGGCGGAG
CGAGGAGCGCGCATCGTAGCCTTCAACCCGGTCCGCGAGCGCGGGCTGGAACGCTTTGCCGACCCGCAGGACAAGCTGGA
AATGCTGCATGGCGGCAGCGAGCCGATCACGAGCGATTATTTCCAGCCGCGCCTTGGCGGGGATCTTGCCGCTTTCCGCG
GCATGGCGAAGGCCGTGTTCGCTGCCGACGATGCAGCACTTGCTGCCGGACGGCCTTCTGTTCTCGACCGGGCGTTTCTG
GCTGCGCACACGGCGGAGCTGGAAGCCTACCGGGCTGCGGTGGATGCGACTTCCTGGGATGAGATCGAGGACCAGTCCGG
CCTTCTTCGCCAATCGCTGGAGCAGGCGGCGGAAATCTATATGCAGGCTGGGCGTGTCATCTGCACCTGGGCGATAGGCA
TCACGCAGCACCGCCATTCGGTCATCACGATCCGCGAAATCACCAATTTCATGCTGTTGCGGGGCAATATCGGTAAGCCC
GGCGCGGGGCTCTGCCCGGTGCGCGGCCATTCCAACGTGCAAGGGGACCGGACGGTCGGCATCAACGAGCATCCGCCGGT
TGCGTTTCTCGACGTGCTGGAAAGGGAATTCGGTTTCAAGCCGCCGCGCGAGCCCGGACATAATGTGCTGGGCGCTATCG
GCGCGATGCTGGATGGTACGGCGCAGGCTTTTGTTGCGCTTGGCGGCAATTTCGCCCGTGCAACACCGGACAGCCCGATC
ATTTCGAGGGCGCTGTCCAGCCAGCGGTTGACGGTTCATATCGCAACCAAGCTCAACCATTCACATCTGGTGCCGGGGCG
GGATTCTTTCATCCTGCCATGTCTGGGCCACACTGAAATAGACCTCAATTCCAAAGGCGTGGCGCAGATCGTGACGGTGG
AGGATTCGATGAGCATGGTGCACGGGTCGGGTGGCATCAACCAGCCCGCTTCGCCGCTCCTTCGCTCCGAAGTTGCCATT
ATCGCGGGCATGGCCAATGCCACGCTGGGACCAAAGCCCGTGGACTGGCTGGCGCTTGCCGATGATTACGATCTTATCCG
CGAGCATATTGCGCGGGTGCTGCCGGATTTCCACGATTATAATCGCCGTGTGCGGGTGCCGCGCGGGTTTCACCTGCGCA
ATGCTGCCCGCGACCTTGAGTGGAATACGCCAACGGGCAAGGCAACGTTCTGGACCGGTGCCCTGCCGCAAGCGATCGAG
CACCAGCAGGTGCGGGATAAGCCGGGACGTTATGTGCTGCAAACCTTCCGCAGTCACGACCAGTACAACACCACGATTTA
TGGCATGAATGACCGTTATCGCGGTGTTTACGGCGAGCGCCATGTGGTCTTCATGAACCCGCTTGATATGGCCGATCTGG
GTGTCGAGGCCGGAGACCGGGCCGATATTGTTGGAGAGTTCGATGATGGCGTGGAGCGTGTTGCCGCGAATTTCCGTTTC
GTGCCTTATGACATTCCGCGCGGCTGCATCGCTGGCTACTATCCTGAAATGAATGTGCTGGTGCCGCTTGGCAGTGCGGG
CGACGAGAGCGACACGCCCACGTCCAAATCGATCATTGTATCGTTCCGGCTTAACCGGACAAAGGCTGCATGA

Upstream 100 bases:

>100_bases
TTGAAGCTGTGCACTTTTCTTCTTATGCTATTGGCTCCCGCCCCGGCACAATTTGCTGGCAGGTCATGGCGGCCAGGCAT
TGTGCTTACAGGATGAAGAG

Downstream 100 bases:

>100_bases
TGGATGAAGATGAGGCCGAATATATGCGTCTGGTCGAGGCGCTGAAAGCCGAAGCGGGCAGGCTTTCGGGGCTCGGCGCG
GGTATTGTTGCCGGTCTTGC

Product: oxidoreductase alpha, molybdopterin subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 769

Protein sequence:

>770_residues
MSKGKKTGFIGKRSSAAGGWGALKSCGQQLLASGAPLAGARALLKANQPDGFDCPGCAWGDPEHGSSFEFCENGVKAVAW
EATDRRTTPAFFREHTVSKLREWTDYDLENTGRLTHPMRYNTATDKYEAVEWDEAFQAIGGILKSFDTPDRVEFYTSGRA
SNEAAFLYQLFVRAYGTNNFPDCSNMCHEASGVALTQSVGVGKGTVLLEDFEQADAIFVVGQNPGTNHPRMLGDLRRAAE
RGARIVAFNPVRERGLERFADPQDKLEMLHGGSEPITSDYFQPRLGGDLAAFRGMAKAVFAADDAALAAGRPSVLDRAFL
AAHTAELEAYRAAVDATSWDEIEDQSGLLRQSLEQAAEIYMQAGRVICTWAIGITQHRHSVITIREITNFMLLRGNIGKP
GAGLCPVRGHSNVQGDRTVGINEHPPVAFLDVLEREFGFKPPREPGHNVLGAIGAMLDGTAQAFVALGGNFARATPDSPI
ISRALSSQRLTVHIATKLNHSHLVPGRDSFILPCLGHTEIDLNSKGVAQIVTVEDSMSMVHGSGGINQPASPLLRSEVAI
IAGMANATLGPKPVDWLALADDYDLIREHIARVLPDFHDYNRRVRVPRGFHLRNAARDLEWNTPTGKATFWTGALPQAIE
HQQVRDKPGRYVLQTFRSHDQYNTTIYGMNDRYRGVYGERHVVFMNPLDMADLGVEAGDRADIVGEFDDGVERVAANFRF
VPYDIPRGCIAGYYPEMNVLVPLGSAGDESDTPTSKSIIVSFRLNRTKAA

Sequences:

>Translated_770_residues
MSKGKKTGFIGKRSSAAGGWGALKSCGQQLLASGAPLAGARALLKANQPDGFDCPGCAWGDPEHGSSFEFCENGVKAVAW
EATDRRTTPAFFREHTVSKLREWTDYDLENTGRLTHPMRYNTATDKYEAVEWDEAFQAIGGILKSFDTPDRVEFYTSGRA
SNEAAFLYQLFVRAYGTNNFPDCSNMCHEASGVALTQSVGVGKGTVLLEDFEQADAIFVVGQNPGTNHPRMLGDLRRAAE
RGARIVAFNPVRERGLERFADPQDKLEMLHGGSEPITSDYFQPRLGGDLAAFRGMAKAVFAADDAALAAGRPSVLDRAFL
AAHTAELEAYRAAVDATSWDEIEDQSGLLRQSLEQAAEIYMQAGRVICTWAIGITQHRHSVITIREITNFMLLRGNIGKP
GAGLCPVRGHSNVQGDRTVGINEHPPVAFLDVLEREFGFKPPREPGHNVLGAIGAMLDGTAQAFVALGGNFARATPDSPI
ISRALSSQRLTVHIATKLNHSHLVPGRDSFILPCLGHTEIDLNSKGVAQIVTVEDSMSMVHGSGGINQPASPLLRSEVAI
IAGMANATLGPKPVDWLALADDYDLIREHIARVLPDFHDYNRRVRVPRGFHLRNAARDLEWNTPTGKATFWTGALPQAIE
HQQVRDKPGRYVLQTFRSHDQYNTTIYGMNDRYRGVYGERHVVFMNPLDMADLGVEAGDRADIVGEFDDGVERVAANFRF
VPYDIPRGCIAGYYPEMNVLVPLGSAGDESDTPTSKSIIVSFRLNRTKAA
>Mature_769_residues
SKGKKTGFIGKRSSAAGGWGALKSCGQQLLASGAPLAGARALLKANQPDGFDCPGCAWGDPEHGSSFEFCENGVKAVAWE
ATDRRTTPAFFREHTVSKLREWTDYDLENTGRLTHPMRYNTATDKYEAVEWDEAFQAIGGILKSFDTPDRVEFYTSGRAS
NEAAFLYQLFVRAYGTNNFPDCSNMCHEASGVALTQSVGVGKGTVLLEDFEQADAIFVVGQNPGTNHPRMLGDLRRAAER
GARIVAFNPVRERGLERFADPQDKLEMLHGGSEPITSDYFQPRLGGDLAAFRGMAKAVFAADDAALAAGRPSVLDRAFLA
AHTAELEAYRAAVDATSWDEIEDQSGLLRQSLEQAAEIYMQAGRVICTWAIGITQHRHSVITIREITNFMLLRGNIGKPG
AGLCPVRGHSNVQGDRTVGINEHPPVAFLDVLEREFGFKPPREPGHNVLGAIGAMLDGTAQAFVALGGNFARATPDSPII
SRALSSQRLTVHIATKLNHSHLVPGRDSFILPCLGHTEIDLNSKGVAQIVTVEDSMSMVHGSGGINQPASPLLRSEVAII
AGMANATLGPKPVDWLALADDYDLIREHIARVLPDFHDYNRRVRVPRGFHLRNAARDLEWNTPTGKATFWTGALPQAIEH
QQVRDKPGRYVLQTFRSHDQYNTTIYGMNDRYRGVYGERHVVFMNPLDMADLGVEAGDRADIVGEFDDGVERVAANFRFV
PYDIPRGCIAGYYPEMNVLVPLGSAGDESDTPTSKSIIVSFRLNRTKAA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=749, Percent_Identity=48.9986648865153, Blast_Score=750, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=377, Percent_Identity=29.973474801061, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1788534, Length=401, Percent_Identity=23.4413965087282, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84099; Mature: 83967

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGKKTGFIGKRSSAAGGWGALKSCGQQLLASGAPLAGARALLKANQPDGFDCPGCAWG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
DPEHGSSFEFCENGVKAVAWEATDRRTTPAFFREHTVSKLREWTDYDLENTGRLTHPMRY
CCCCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEC
NTATDKYEAVEWDEAFQAIGGILKSFDTPDRVEFYTSGRASNEAAFLYQLFVRAYGTNNF
CCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHEASGVALTQSVGVGKGTVLLEDFEQADAIFVVGQNPGTNHPRMLGDLRRAAE
CCHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
RGARIVAFNPVRERGLERFADPQDKLEMLHGGSEPITSDYFQPRLGGDLAAFRGMAKAVF
CCCEEEEECHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH
AADDAALAAGRPSVLDRAFLAAHTAELEAYRAAVDATSWDEIEDQSGLLRQSLEQAAEIY
HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MQAGRVICTWAIGITQHRHSVITIREITNFMLLRGNIGKPGAGLCPVRGHSNVQGDRTVG
HHCCCEEEEEEEHHCCCCCCEEEHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEC
INEHPPVAFLDVLEREFGFKPPREPGHNVLGAIGAMLDGTAQAFVALGGNFARATPDSPI
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHH
ISRALSSQRLTVHIATKLNHSHLVPGRDSFILPCLGHTEIDLNSKGVAQIVTVEDSMSMV
HHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEECCCCCCCEEEEEECCCHHHH
HGSGGINQPASPLLRSEVAIIAGMANATLGPKPVDWLALADDYDLIREHIARVLPDFHDY
CCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHCC
NRRVRVPRGFHLRNAARDLEWNTPTGKATFWTGALPQAIEHQQVRDKPGRYVLQTFRSHD
CCEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCC
QYNTTIYGMNDRYRGVYGERHVVFMNPLDMADLGVEAGDRADIVGEFDDGVERVAANFRF
CCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEE
VPYDIPRGCIAGYYPEMNVLVPLGSAGDESDTPTSKSIIVSFRLNRTKAA
EECCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
SKGKKTGFIGKRSSAAGGWGALKSCGQQLLASGAPLAGARALLKANQPDGFDCPGCAWG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
DPEHGSSFEFCENGVKAVAWEATDRRTTPAFFREHTVSKLREWTDYDLENTGRLTHPMRY
CCCCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEC
NTATDKYEAVEWDEAFQAIGGILKSFDTPDRVEFYTSGRASNEAAFLYQLFVRAYGTNNF
CCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHEASGVALTQSVGVGKGTVLLEDFEQADAIFVVGQNPGTNHPRMLGDLRRAAE
CCHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
RGARIVAFNPVRERGLERFADPQDKLEMLHGGSEPITSDYFQPRLGGDLAAFRGMAKAVF
CCCEEEEECHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH
AADDAALAAGRPSVLDRAFLAAHTAELEAYRAAVDATSWDEIEDQSGLLRQSLEQAAEIY
HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MQAGRVICTWAIGITQHRHSVITIREITNFMLLRGNIGKPGAGLCPVRGHSNVQGDRTVG
HHCCCEEEEEEEHHCCCCCCEEEHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEC
INEHPPVAFLDVLEREFGFKPPREPGHNVLGAIGAMLDGTAQAFVALGGNFARATPDSPI
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHH
ISRALSSQRLTVHIATKLNHSHLVPGRDSFILPCLGHTEIDLNSKGVAQIVTVEDSMSMV
HHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEECCCCCCCEEEEEECCCHHHH
HGSGGINQPASPLLRSEVAIIAGMANATLGPKPVDWLALADDYDLIREHIARVLPDFHDY
CCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHCC
NRRVRVPRGFHLRNAARDLEWNTPTGKATFWTGALPQAIEHQQVRDKPGRYVLQTFRSHD
CCEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCC
QYNTTIYGMNDRYRGVYGERHVVFMNPLDMADLGVEAGDRADIVGEFDDGVERVAANFRF
CCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEE
VPYDIPRGCIAGYYPEMNVLVPLGSAGDESDTPTSKSIIVSFRLNRTKAA
EECCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]