Click here to switch to the map view.

The map label for this gene is arcB [H]

Identifier: 225686660

GI number: 225686660

Start: 858833

End: 859909

Strand: Reverse

Name: arcB [H]

Synonym: BMEA_B0880

Alternate gene names: 225686660

Gene position: 859909-858833 (Counterclockwise)

Preceding gene: 225686661

Following gene: 225686658

Centisome position: 72.53

GC content: 56.82

Gene sequence:

>1077_bases
ATGACCCAACCGAACCTCAATATCGTTCCTTTCGTCAGCGTCGATCATATGATGAAGCTGGTGCTTCGCGTCGGCGTTGA
GACCTTTCTTAAGGAACTTGCCGGTTATGTGGAGGAAGATTTCCGTCGCTGGCAAAATTTTGACAAGACGCCGCGCGTGG
CCTCGCATTCCAAGGAAGGCGTGATCGAGCTGATGCCGACGAGCGACGGCACGCTCTATGGCTTCAAATATGTGAACGGC
CATCCGAAGAACACTCGTGATGGTCTCCAGACCGTTACGGCATTCGGCGTGCTGGCTGATGTGGGCAGCGGTTATCCGAT
GCTGCTGACCGAAATGACCATTTTGACCGCGCTGCGCACGGCTGCAACTTCTGCCGTCGGGGCGAAGCATCTTGCGCCGA
AGAATGCCCGCACCATGGCGATTATCGGCAATGGCGCGCAGAGCGAGTTTCAGGCGCTGGCCTTCAAGGCGATCCTGGGC
GTGGACAAGTTGCGCCTTTATGACCTCGACCCGCAAGCGACTGCCAAATGCATCCGAAACCTGCAAGGGGCCGGTTTCAA
CATTGTTGCCTGCAAGAGCGTGGAGGAAGCGGTCGAAGGGGCAGATATCATCACCACCGTCACAGCCGACAAGGCCAATG
CGACGATCCTGACCGACAACATGGTCGGCGCTGGGGTGCATATCAATGCGGTTGGCGGTGATTGCCCCGGCAAGACAGAA
TTGCACGGCGATATCCTTCGCCGTTCGGATATTTTCGTGGAATATCCGCCGCAGACCCGCATCGAAGGTGAAATCCAGCA
ATTGCCGGAAGATTATCCGGTCAATGAGCTATGGGAAGTCATTACCGGCAGGATCGCTGGCCGTAAGGATGCCCGCCAGA
TCACGCTGTTCGACTCGGTCGGCTTTGCGACAGAAGATTTCTCGGCGTTGCGCTATGTGCGTGACAAGCTGAAGGATACG
GGACTTTACGAACAGTTGGACCTGCTGGCCGATCCTGACGAGCCGCGCGATCTCTATGGCATGTTGCTGCGCCATGAGAA
GCTGCTTCAGTCTGAAAGCACCAAGCCTGCCGCCTGA

Upstream 100 bases:

>100_bases
TGGACCTGATGGCGAGCCTTCTGGGCCGCAGCGTCATGGACCGCCCGACCATCAGCTATTGACGTGGCCCATGTGGCTGC
CAAATGCTCAAGGAGCAATG

Downstream 100 bases:

>100_bases
CCAAGGCAGGTTTTAGCTAATCAGAGGGCGACGCGAATGGCGCGGCGCTCTGATGCGGCCTGAATGGGTGGCGATTGCCA
TTTCAAAACTGTCGGCGATG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEGVIELMPTSDGTLYGFKYVNG
HPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVGAKHLAPKNARTMAIIGNGAQSEFQALAFKAILG
VDKLRLYDLDPQATAKCIRNLQGAGFNIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGVHINAVGGDCPGKTE
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSVGFATEDFSALRYVRDKLKDT
GLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA

Sequences:

>Translated_358_residues
MTQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEGVIELMPTSDGTLYGFKYVNG
HPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVGAKHLAPKNARTMAIIGNGAQSEFQALAFKAILG
VDKLRLYDLDPQATAKCIRNLQGAGFNIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGVHINAVGGDCPGKTE
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSVGFATEDFSALRYVRDKLKDT
GLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA
>Mature_357_residues
TQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEGVIELMPTSDGTLYGFKYVNGH
PKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVGAKHLAPKNARTMAIIGNGAQSEFQALAFKAILGV
DKLRLYDLDPQATAKCIRNLQGAGFNIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGVHINAVGGDCPGKTEL
HGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSVGFATEDFSALRYVRDKLKDTG
LYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=266, Percent_Identity=28.1954887218045, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4503065, Length=266, Percent_Identity=28.1954887218045, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24642678, Length=255, Percent_Identity=29.0196078431373, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 39285; Mature: 39154

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEG
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VIELMPTSDGTLYGFKYVNGHPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRT
EEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AATSAVGAKHLAPKNARTMAIIGNGAQSEFQALAFKAILGVDKLRLYDLDPQATAKCIRN
HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
LQGAGFNIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGVHINAVGGDCPGKTE
HCCCCEEEEEECCHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCC
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSV
HHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECC
GFATEDFSALRYVRDKLKDTGLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQPNLNIVPFVSVDHMMKLVLRVGVETFLKELAGYVEEDFRRWQNFDKTPRVASHSKEG
CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VIELMPTSDGTLYGFKYVNGHPKNTRDGLQTVTAFGVLADVGSGYPMLLTEMTILTALRT
EEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AATSAVGAKHLAPKNARTMAIIGNGAQSEFQALAFKAILGVDKLRLYDLDPQATAKCIRN
HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
LQGAGFNIVACKSVEEAVEGADIITTVTADKANATILTDNMVGAGVHINAVGGDCPGKTE
HCCCCEEEEEECCHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCC
LHGDILRRSDIFVEYPPQTRIEGEIQQLPEDYPVNELWEVITGRIAGRKDARQITLFDSV
HHHHHHHCCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECC
GFATEDFSALRYVRDKLKDTGLYEQLDLLADPDEPRDLYGMLLRHEKLLQSESTKPAA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]