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The map label for this gene is rbsC [H]

Identifier: 225686620

GI number: 225686620

Start: 823864

End: 824904

Strand: Reverse

Name: rbsC [H]

Synonym: BMEA_B0837

Alternate gene names: 225686620

Gene position: 824904-823864 (Counterclockwise)

Preceding gene: 225686621

Following gene: 225686619

Centisome position: 69.58

GC content: 59.75

Gene sequence:

>1041_bases
ATGTCAGTCACGAGCACCAACAAGGAAACAGCGGCTCCGACCGGCGCGAAGCGGAAGACCAGCCTCGTGCATCTGCTGCT
CGAGGGTCGCGCATTCTTTGCGCTGATCGCGATCATCGCCGTCTTCTCGTTCCTTTCGCCCTATTACTTTACGGTCGATA
ATTTCCTCATCATGTCGTCGCATGTGGCCATTTTCGGCCTTCTGGCGATTGGTATGCTGCTCGTCATCCTCAATGGCGGC
ATCGACCTTTCGGTCGGCTCCACGCTGGGGCTGGCCGGTGTGGTCGCGGGCTTCCTGATGCAGGGCGTGACCTTGCAGGA
ATTCGGCATCATCCTTTATTTCCCGGTCTGGGCCGTGGTGCTCATCACCTGCGCGCTCGGCGCCTTCGTCGGCGCGGTCA
ATGGTGTGTTGATCGCTTATCTGCGCGTTCCGGCCTTCGTGGCGACGCTTGGCGTTCTTTATTGCGCGCGTGGCGTAGCG
CTTTTGATGACCAACGGTCTCACCTACAACAATCTCGGCGGTCGCCCCGAACTTGGCAATACGGGCTTTGACTGGCTCGG
CTTCAACAAGCTTTTCGGCGTGCCGATCGGTGTGCTGGTGCTGGCAATTCTCGCCATCATCTGCGCCATTGTTTTGAACC
GCACTGCATTCGGCCGCTGGCTCTATGCCTCGGGCGGCAATGAACGGGCGGCGGAACTTTCCGGTGTTCCGGTCAAGCGG
GTCAAGGTGTCGGTCTATGTCATTTCCGGCATCTGCGCTGCCATTGCGGGGCTGGTTCTTTCCTCGCAGCTCACCTCTGC
TGGGCCGACGGCTGGCACCACCTACGAACTGACGGCAATCGCTGCCGTGGTGATCGGTGGCGCTGCGCTCACTGGGGGGC
GCGGTACGATACAGGGCACACTTCTCGGTGCTTTCGTGATCGGTTTCCTTTCCGACGGCCTCGTGATTATCGGCGTGTCC
TCTTACTGGCAGACCGTCTTTACCGGCGCGGTGATCGTGCTCACGGTTCTGCTCAACAGCATTCAATATTCCCGGCGATG
A

Upstream 100 bases:

>100_bases
TCTCCGCCGAATTCGGATCGGACGTGTCCAAGGAAAAGATCATGGCCGCCTCGGGCGAAGCCATGGTCGGTCATTAAAAT
AATCTAGGAGCACTGATCGA

Downstream 100 bases:

>100_bases
TTGGTTACGGCTCCGTCCACCGTTCCGGGCGGAGCCGGTTCTTCATCCTGTCCGGGCATGTCGAAAGGTTTCCAGAAGGC
CGCATCGTCTTAAAAACGGC

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSVTSTNKETAAPTGAKRKTSLVHLLLEGRAFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGMLLVILNGG
IDLSVGSTLGLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVGAVNGVLIAYLRVPAFVATLGVLYCARGVA
LLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILAIICAIVLNRTAFGRWLYASGGNERAAELSGVPVKR
VKVSVYVISGICAAIAGLVLSSQLTSAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVS
SYWQTVFTGAVIVLTVLLNSIQYSRR

Sequences:

>Translated_346_residues
MSVTSTNKETAAPTGAKRKTSLVHLLLEGRAFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGMLLVILNGG
IDLSVGSTLGLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVGAVNGVLIAYLRVPAFVATLGVLYCARGVA
LLMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILAIICAIVLNRTAFGRWLYASGGNERAAELSGVPVKR
VKVSVYVISGICAAIAGLVLSSQLTSAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVS
SYWQTVFTGAVIVLTVLLNSIQYSRR
>Mature_345_residues
SVTSTNKETAAPTGAKRKTSLVHLLLEGRAFFALIAIIAVFSFLSPYYFTVDNFLIMSSHVAIFGLLAIGMLLVILNGGI
DLSVGSTLGLAGVVAGFLMQGVTLQEFGIILYFPVWAVVLITCALGAFVGAVNGVLIAYLRVPAFVATLGVLYCARGVAL
LMTNGLTYNNLGGRPELGNTGFDWLGFNKLFGVPIGVLVLAILAIICAIVLNRTAFGRWLYASGGNERAAELSGVPVKRV
KVSVYVISGICAAIAGLVLSSQLTSAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGTLLGAFVIGFLSDGLVIIGVSS
YWQTVFTGAVIVLTVLLNSIQYSRR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=315, Percent_Identity=43.1746031746032, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1788896, Length=340, Percent_Identity=35.8823529411765, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1789992, Length=367, Percent_Identity=33.5149863760218, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790524, Length=338, Percent_Identity=33.4319526627219, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1788471, Length=338, Percent_Identity=34.9112426035503, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI145693152, Length=301, Percent_Identity=32.890365448505, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI87082395, Length=280, Percent_Identity=36.0714285714286, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787794, Length=315, Percent_Identity=32.3809523809524, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787793, Length=298, Percent_Identity=36.5771812080537, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI145693214, Length=268, Percent_Identity=36.9402985074627, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35937; Mature: 35806

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTSTNKETAAPTGAKRKTSLVHLLLEGRAFFALIAIIAVFSFLSPYYFTVDNFLIMSS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
HVAIFGLLAIGMLLVILNGGIDLSVGSTLGLAGVVAGFLMQGVTLQEFGIILYFPVWAVV
HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
LITCALGAFVGAVNGVLIAYLRVPAFVATLGVLYCARGVALLMTNGLTYNNLGGRPELGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCCC
TGFDWLGFNKLFGVPIGVLVLAILAIICAIVLNRTAFGRWLYASGGNERAAELSGVPVKR
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCHHHCCCCCHHH
VKVSVYVISGICAAIAGLVLSSQLTSAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGT
HEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHEECCCCCHHHH
LLGAFVIGFLSDGLVIIGVSSYWQTVFTGAVIVLTVLLNSIQYSRR
HHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVTSTNKETAAPTGAKRKTSLVHLLLEGRAFFALIAIIAVFSFLSPYYFTVDNFLIMSS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
HVAIFGLLAIGMLLVILNGGIDLSVGSTLGLAGVVAGFLMQGVTLQEFGIILYFPVWAVV
HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
LITCALGAFVGAVNGVLIAYLRVPAFVATLGVLYCARGVALLMTNGLTYNNLGGRPELGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCCC
TGFDWLGFNKLFGVPIGVLVLAILAIICAIVLNRTAFGRWLYASGGNERAAELSGVPVKR
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCHHHCCCCCHHH
VKVSVYVISGICAAIAGLVLSSQLTSAGPTAGTTYELTAIAAVVIGGAALTGGRGTIQGT
HEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHEECCCCCHHHH
LLGAFVIGFLSDGLVIIGVSSYWQTVFTGAVIVLTVLLNSIQYSRR
HHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]