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The map label for this gene is cynR [C]

Identifier: 225686565

GI number: 225686565

Start: 760136

End: 760576

Strand: Direct

Name: cynR [C]

Synonym: BMEA_B0777

Alternate gene names: 225686565

Gene position: 760136-760576 (Clockwise)

Preceding gene: 225686564

Following gene: 225686566

Centisome position: 64.12

GC content: 51.02

Gene sequence:

>441_bases
ATGGCGGAGATGGAAGAAATCCGCGTGCTCGCCCAAGACGAGAATGCGCCGCTACGGGGACATGTTTCGATAGGAATGCC
TCCAACCGCTTCTGATATTCTGTCCGAACCGCTGGTATCGACCTTTCAAGAAACCCATCCGGACGCGACATTACGCATAG
TCAACGCCTATTCCGGCTATTTGGTCGACTGGCTCCACAGAGGCGATATCGATGCCGCGATCCTCTATAATCCGAAGAAT
GCGCGATCATTTCATATCCAACCGCTTTTGGAAGAAGCGCTGTTCCTCATTGGTCCTGCAAATTTCGATAAGGTACGAGG
CCGTCAGATTACTTTCAGCGAACTGGAAAAGGAACGTTTGCTTCTACCCAGTATCGGGAACGGCTTGCGGTCACTGCTTG
AAAAATACGCACAAGAAGCGGGTATCACCCTCAACGTTTAG

Upstream 100 bases:

>100_bases
CTGAGCAGACAAATAAGGCTGCTGGAACAGGAGTTGGGAACGCGGCTGTTCGATCGCCACCGAGAAGGGGCATGACGTTC
TGCGTCACGCGCAGCGAATT

Downstream 100 bases:

>100_bases
TTTGAGGCTGACAGTTATTCAACGTTGAAATCAATTGTCCAGAATAATCATGGTGCGACTGTCCTTCCTCTGGCCCCGAT
CAGGGAGGAGTTAAATGCCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Protein; LysR Family Regulatory Helix-Turn-Helix Protein; LysR-Family Transcriptional Regulator; Nitrogen Assimilation Regulatory Protein; Transcriptional Regulator LysR Family Protein; Nac Protein; Transcriptional Regulatory Protein; TcuABC Regulator; Transcriptional Regulator Lysr Family; Protochatechuate Degradation Transcriptional Regulator; Nitrogen Assimilation Control Protein; Transcriptional Regulator Of LysR Family

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAEMEEIRVLAQDENAPLRGHVSIGMPPTASDILSEPLVSTFQETHPDATLRIVNAYSGYLVDWLHRGDIDAAILYNPKN
ARSFHIQPLLEEALFLIGPANFDKVRGRQITFSELEKERLLLPSIGNGLRSLLEKYAQEAGITLNV

Sequences:

>Translated_146_residues
MAEMEEIRVLAQDENAPLRGHVSIGMPPTASDILSEPLVSTFQETHPDATLRIVNAYSGYLVDWLHRGDIDAAILYNPKN
ARSFHIQPLLEEALFLIGPANFDKVRGRQITFSELEKERLLLPSIGNGLRSLLEKYAQEAGITLNV
>Mature_145_residues
AEMEEIRVLAQDENAPLRGHVSIGMPPTASDILSEPLVSTFQETHPDATLRIVNAYSGYLVDWLHRGDIDAAILYNPKNA
RSFHIQPLLEEALFLIGPANFDKVRGRQITFSELEKERLLLPSIGNGLRSLLEKYAQEAGITLNV

Specific function: Positive Regulatory Protein For The Cyn Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16281; Mature: 16150

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMEEIRVLAQDENAPLRGHVSIGMPPTASDILSEPLVSTFQETHPDATLRIVNAYSGY
CCCHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
LVDWLHRGDIDAAILYNPKNARSFHIQPLLEEALFLIGPANFDKVRGRQITFSELEKERL
HHHHHHCCCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHC
LLPSIGNGLRSLLEKYAQEAGITLNV
CCCCCCHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure 
AEMEEIRVLAQDENAPLRGHVSIGMPPTASDILSEPLVSTFQETHPDATLRIVNAYSGY
CCHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
LVDWLHRGDIDAAILYNPKNARSFHIQPLLEEALFLIGPANFDKVRGRQITFSELEKERL
HHHHHHCCCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHC
LLPSIGNGLRSLLEKYAQEAGITLNV
CCCCCCHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA