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The map label for this gene is rsmE [H]

Identifier: 225686530

GI number: 225686530

Start: 721813

End: 722541

Strand: Direct

Name: rsmE [H]

Synonym: BMEA_B0740

Alternate gene names: 225686530

Gene position: 721813-722541 (Clockwise)

Preceding gene: 225686521

Following gene: 225686531

Centisome position: 60.89

GC content: 61.73

Gene sequence:

>729_bases
ATGCAGAGACTTTACGTTGAAAACGAGCTTCGGGCCGGGGTCTCCTTCGATGCCGGGGCGCAGGCTGCCCATTATCTGAC
TCATGTGCTTCGCATGAAGGAAGGCGACGAGGTTCTGGTCTTTAACGGGCGCGACGGCGAGTGGAAAGCGAGCCTTCAGC
CGGAGGGCAGAAAGCGGCTTCTCCTCGAACCCTTGGAGCAGACACGCCCTCAACCGAAGCCGAGCGAGCTTATCTATTGC
TTTGCGCCGCTGAAACAGGGGCGGCTCGATTACATGGTGCAGAAGGCGGTGGAAATGGGGGCAGGCGTTTTGCAGCCCGT
CATCACCCAGCATACACAGGCGCTCAGGCTCGGGACCGAGCGCATCAGGGCCAATGCCATTGAAGCGGCCGAACAATGCG
GCGTGCTTTCCCTTCCCGACTGCCGGGAGGCGTTACGCTTCGACCGTTTTCTGGATCAGTGGGACACCTCGCGCCGCCTG
ATCTTCTGTGATGAAGGTCACGAATCGGATGATCCGCTATCCATCCTCACCGGGCTGGAACCGGGGCCATCCGGGCTCCT
GATCGGGCCGGAAGGCGGCTTTTCGGAAGAAGAGCGCCAGCTTCTCCACCGCCTGCCTTTTGTGACGGCCATCCCGCTTG
GCCCCCGTATCCTGCGGGCCGATACTGCTGCGGTTGCGGCCATGGCGCTTGTGCAGGCTGTGCTGGGCGACTGGAGAAAT
GCAGCGTGA

Upstream 100 bases:

>100_bases
AAGCCTTTGCCTTTATGAACACATTACCATTTACCCGCCAAAAAACTTGACCATACCCCCTGTGCTCTGCCATCGATGCC
CCATGCGCGCGAATTACAGA

Downstream 100 bases:

>100_bases
AGTTTTCCAAATTTCGAGGTTCAATGGAATTGACTTGCGTGATTTGACAAATTTGTCCAATCACGCTGACAAACTGAAAT
ACGACCAGGGATAAGTTGCA

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MQRLYVENELRAGVSFDAGAQAAHYLTHVLRMKEGDEVLVFNGRDGEWKASLQPEGRKRLLLEPLEQTRPQPKPSELIYC
FAPLKQGRLDYMVQKAVEMGAGVLQPVITQHTQALRLGTERIRANAIEAAEQCGVLSLPDCREALRFDRFLDQWDTSRRL
IFCDEGHESDDPLSILTGLEPGPSGLLIGPEGGFSEEERQLLHRLPFVTAIPLGPRILRADTAAVAAMALVQAVLGDWRN
AA

Sequences:

>Translated_242_residues
MQRLYVENELRAGVSFDAGAQAAHYLTHVLRMKEGDEVLVFNGRDGEWKASLQPEGRKRLLLEPLEQTRPQPKPSELIYC
FAPLKQGRLDYMVQKAVEMGAGVLQPVITQHTQALRLGTERIRANAIEAAEQCGVLSLPDCREALRFDRFLDQWDTSRRL
IFCDEGHESDDPLSILTGLEPGPSGLLIGPEGGFSEEERQLLHRLPFVTAIPLGPRILRADTAAVAAMALVQAVLGDWRN
AA
>Mature_242_residues
MQRLYVENELRAGVSFDAGAQAAHYLTHVLRMKEGDEVLVFNGRDGEWKASLQPEGRKRLLLEPLEQTRPQPKPSELIYC
FAPLKQGRLDYMVQKAVEMGAGVLQPVITQHTQALRLGTERIRANAIEAAEQCGVLSLPDCREALRFDRFLDQWDTSRRL
IFCDEGHESDDPLSILTGLEPGPSGLLIGPEGGFSEEERQLLHRLPFVTAIPLGPRILRADTAAVAAMALVQAVLGDWRN
AA

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=246, Percent_Identity=27.6422764227642, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26877; Mature: 26877

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLYVENELRAGVSFDAGAQAAHYLTHVLRMKEGDEVLVFNGRDGEWKASLQPEGRKRL
CCCEEECHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCHHH
LLEPLEQTRPQPKPSELIYCFAPLKQGRLDYMVQKAVEMGAGVLQPVITQHTQALRLGTE
HHCCHHHCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RIRANAIEAAEQCGVLSLPDCREALRFDRFLDQWDTSRRLIFCDEGHESDDPLSILTGLE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHEECCC
PGPSGLLIGPEGGFSEEERQLLHRLPFVTAIPLGPRILRADTAAVAAMALVQAVLGDWRN
CCCCCEEECCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AA
CC
>Mature Secondary Structure
MQRLYVENELRAGVSFDAGAQAAHYLTHVLRMKEGDEVLVFNGRDGEWKASLQPEGRKRL
CCCEEECHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCHHH
LLEPLEQTRPQPKPSELIYCFAPLKQGRLDYMVQKAVEMGAGVLQPVITQHTQALRLGTE
HHCCHHHCCCCCCCHHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RIRANAIEAAEQCGVLSLPDCREALRFDRFLDQWDTSRRLIFCDEGHESDDPLSILTGLE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHEECCC
PGPSGLLIGPEGGFSEEERQLLHRLPFVTAIPLGPRILRADTAAVAAMALVQAVLGDWRN
CCCCCEEECCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]