Click here to switch to the map view.

The map label for this gene is yecS [C]

Identifier: 225686457

GI number: 225686457

Start: 642035

End: 642715

Strand: Direct

Name: yecS [C]

Synonym: BMEA_B0654

Alternate gene names: 225686457

Gene position: 642035-642715 (Clockwise)

Preceding gene: 225686456

Following gene: 225686458

Centisome position: 54.16

GC content: 58.44

Gene sequence:

>681_bases
GTGCCAGACTGGCTTCAACTCATGGCGGATTCCCTGCCTACACTTCTCTGGGCCGGGTTGATCTTCACCATTCCGCTCAT
CCTGCTTTCCTTTACCTTCGGCCTTGCGCTCGGCCTGCTGACCGCGCTCGTGCGTCTTTTCGCACCCGTCTGGCTATCCT
CCGTCGCACGGTTCTATGTCTGGATTTTCCGTGGCACACCGCTTCTCGTCCAGCTTTTCGTGATCTTCTATGGCCTGCCG
AGCATCGGTGTCTATCTTGATGCATTTCCCGCCGCGCTGATCGGTTTCACGCTCAATATCGGCGCCTATAGTTCCGAAAT
CATTCGCGCCGTCATTTCCTCGGTGCCGAAAGGCCAATGGGAGGCCGCCTATTCCATCGGCATGAGCTGGCGGCAGGCGC
TTATCCGCACCATTCTTCCGCAAGCGACACGAACCGCCGTACCGCCGCTTTCCAACACCTTCATCTCGCTGATCAAGGAC
ACGTCACTGGCGGCCGCAATCACCGTGCCGGAGCTGTTCCAGTCCGCGCAGCGCATCGTCGCCACCACCTATGAGCCGCT
CATTCTCTATATCGAAGCAGCACTCATCTATCTGGCGCTGAGTTCCATTCTATCGGCCCTGCAAGTGCGTCTGGAACGGC
GCTTCGGACGTTATGGCGGCACGCTGGAGACAAACGCATGA

Upstream 100 bases:

>100_bases
GAATTGCCAGACCGTATAACATGACCGAATGCACTTCTTGCTGTGCATGTTCATTCCGGCCCGATTTATTATCCCAATTA
CTGCGAAGGAGCCGAAACTA

Downstream 100 bases:

>100_bases
TCGAGCTGCAACATATCGTAAAGCGTTTCGACGACGCCGTTATCCTGAACGACATAAACATCACGATTGCCGAAGGCACG
GTGACGGCTCTCGTTGGCCC

Product: amino acid ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPLLVQLFVIFYGLP
SIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKD
TSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLETNA

Sequences:

>Translated_226_residues
MPDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPLLVQLFVIFYGLP
SIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKD
TSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLETNA
>Mature_225_residues
PDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPLLVQLFVIFYGLPS
IGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDT
SLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLETNA

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=53.6697247706422, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1787030, Length=202, Percent_Identity=37.1287128712871, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788645, Length=232, Percent_Identity=34.9137931034483, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787086, Length=221, Percent_Identity=33.4841628959276, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082239, Length=216, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=30.8370044052863, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=34.0807174887892, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786874, Length=222, Percent_Identity=25.6756756756757, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI48994930, Length=71, Percent_Identity=46.4788732394366, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24889; Mature: 24758

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFAPVWLSSVARFYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIFRGTPLLVQLFVIFYGLPSIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQW
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
EAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIV
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLETNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFAPVWLSSVARFYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIFRGTPLLVQLFVIFYGLPSIGVYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQW
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCH
EAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIV
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTYEPLILYIEAALIYLALSSILSALQVRLERRFGRYGGTLETNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]