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The map label for this gene is slyA [H]

Identifier: 225686273

GI number: 225686273

Start: 436811

End: 437299

Strand: Direct

Name: slyA [H]

Synonym: BMEA_B0448

Alternate gene names: 225686273

Gene position: 436811-437299 (Clockwise)

Preceding gene: 225686269

Following gene: 225686274

Centisome position: 36.85

GC content: 55.83

Gene sequence:

>489_bases
ATGACAACATCAGATAATGAATTCCCAGAGAGCGAACTCCCAGAAAATGAACTCAATGCCGCGTTTACCATGGGTCTGTC
CACGGCGGCCCGGAAAATGCGCAATCTTTTCGATTCCCGTGTGCGGGAGCGCGGATTGACGCTGGCGCGTGCCCGCGTTC
TGCTGCTGCTTGCACAACAGCGCGACTGGAACCAGCGTGAGTTGGCCGATGCTTTGGAAATAGAGCATCCTTCGGTGGTG
CGTCTTCTGGACGGCCTTGAAAAACAGGGAATGATCGTTCGCGCCTCCGTTGAGGGGGATCGGCGCGCAAAGCGCATCGA
ATTGACGGAGGAAGCGCAGGCGCAGGTCCGTCAGCTTGGGGAAATAACGCGGACGATTCGGCAGGAAATGCTGGAAAATA
TCGATCGGCAATCGCTCGAGACGACGCTTGAGGTTTTTCACGCAATAAGCCGCAAGGTCGAAAAAGCATTGAACGGGCAG
GATGGCTGA

Upstream 100 bases:

>100_bases
AGGCGCTCTCATTCTTTTGTAATGAAATGCAGAAAAAGAGGGTGACATTTGTTGGAGTCATCCTATATATAGCTGCACAT
TATATGTATAGCTATATATC

Downstream 100 bases:

>100_bases
CGCACCGGACGATAAGAAAGAAGCGCCGGAAGCGGCACTTGCTGCTCCCCAGCCTGCGCACATGCCGCTTTATATGTCGA
TAATCTATATTGCGGCTTCT

Product: transcriptional regulator slyA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTTSDNEFPESELPENELNAAFTMGLSTAARKMRNLFDSRVRERGLTLARARVLLLLAQQRDWNQRELADALEIEHPSVV
RLLDGLEKQGMIVRASVEGDRRAKRIELTEEAQAQVRQLGEITRTIRQEMLENIDRQSLETTLEVFHAISRKVEKALNGQ
DG

Sequences:

>Translated_162_residues
MTTSDNEFPESELPENELNAAFTMGLSTAARKMRNLFDSRVRERGLTLARARVLLLLAQQRDWNQRELADALEIEHPSVV
RLLDGLEKQGMIVRASVEGDRRAKRIELTEEAQAQVRQLGEITRTIRQEMLENIDRQSLETTLEVFHAISRKVEKALNGQ
DG
>Mature_161_residues
TTSDNEFPESELPENELNAAFTMGLSTAARKMRNLFDSRVRERGLTLARARVLLLLAQQRDWNQRELADALEIEHPSVVR
LLDGLEKQGMIVRASVEGDRRAKRIELTEEAQAQVRQLGEITRTIRQEMLENIDRQSLETTLEVFHAISRKVEKALNGQD
G

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=116, Percent_Identity=38.7931034482759, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18497; Mature: 18366

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSDNEFPESELPENELNAAFTMGLSTAARKMRNLFDSRVRERGLTLARARVLLLLAQQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RDWNQRELADALEIEHPSVVRLLDGLEKQGMIVRASVEGDRRAKRIELTEEAQAQVRQLG
CCCCHHHHHHHHHCCCHHHHHHHHCHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
EITRTIRQEMLENIDRQSLETTLEVFHAISRKVEKALNGQDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTSDNEFPESELPENELNAAFTMGLSTAARKMRNLFDSRVRERGLTLARARVLLLLAQQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RDWNQRELADALEIEHPSVVRLLDGLEKQGMIVRASVEGDRRAKRIELTEEAQAQVRQLG
CCCCHHHHHHHHHCCCHHHHHHHHCHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
EITRTIRQEMLENIDRQSLETTLEVFHAISRKVEKALNGQDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA