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The map label for this gene is ybhS [H]

Identifier: 225686268

GI number: 225686268

Start: 432236

End: 433375

Strand: Direct

Name: ybhS [H]

Synonym: BMEA_B0443

Alternate gene names: 225686268

Gene position: 432236-433375 (Clockwise)

Preceding gene: 225686267

Following gene: 225686269

Centisome position: 36.46

GC content: 57.11

Gene sequence:

>1140_bases
ATGACGATGCAATGGTTCTCGCTCGCGCGCCTTCGCGCCATGCTGATGAAGGAATTCATCCAGATGTGGCGCGATCATAT
CACTTTCGCGATGATGCTGATCGTGCCGCTCATGCAATTGCTCCTGTTCGGTTTTGCGATCAACAATGATCCCAAAAGCC
TGCCAAGCGCCCTCGTTGCACTGAGCAATGATCATTATACGCGCGCAATGATTTCGGCACTGGAAACGACGAACTATTAC
CGCTTCGACCATGTGGTGCATAGTGCTGCCGAAGCCGATGCGCTTCTGGCCAATGGCAGCGTTTCCTTTGTGGTGACGAT
CCCGTCCGATTTTGCGCGGCGCGTCGATGCGGGCGACAGGCCGCAGCTTTTGATCGAGGCTGACGCCACCGATCCATCCG
TGGCAAGCGGCGCAATCTCTACGCTCAGCACGGTGGCAAGCCAGGCATTGTTGCGCGAGCAGGGCAGACAGGCCGAAGCG
GAAAACGCCTCGCGCAGCCAGCTGGAGGTGGTGGTGCACCGCCGTTACAACCCGGAAGGCATATCGCAATATAATATCGT
GCCGGGCCTGCTCGGCGTGATCCTGCAAATGACGATGGTGATGATGACGGCCATGGCGCTGACGCGCGAAACCGAGCGTG
GCACGATGGAAAATCTGTTGGCCATGCCCGCCACGCCTGCGGAAATCATGCTGGGAAAGATATTGCCCTATCTTGCCGTG
GGCGGGGTACAGATGGTTGTGGTTCTGGTTGCCGCCAAACTTATTTTCGGCGTGCCTTTTGTCGGGTCGCTGACGCTTCT
CCTGAGCAGTGTGCTGATTTTCGTGCTGTCGCTCGTTCTGCTTGGCTATACGATTTCCACCGTGTCGCGCACACAGATGC
AGGCAATGCAGCTTACCTTCTTTTTCTTTCTGCCCTCGCTGATGCTTTCCGGCTTCATGTTCCCGTTTCGTGGAATGCCG
GACTGGGCCCAGGCGCTGGGCAATATTTTTCCGCTCACCTATTTCCTGCGCATCGTCCGTGCGGTGATGCTGAAGGGGGC
AGGGCTTGCCGATATTGCGGGAGAGGTGATGGCGCTTATCCTGTTCGTTTTTCTCTTTGCGGGCTTGGCACTGTTGCGCT
TCCGGCGCACACTGGATTGA

Upstream 100 bases:

>100_bases
ACAGGATCAAGCATCGCGAAGACATCCATGTAGAGGCAGGCCAGACCAGCCTTGAGGATGTTTTCATCCAGTTCATGGCC
GGGGCGAAGGACAATATGCA

Downstream 100 bases:

>100_bases
AAGGCCGAGGACCCACAAATCGGCCAAATGGAGGAAAATGGTGGAAATTACCCGAAACGGATCGCAAGCCTCCCGCAAGG
GACCGGCGGAATGGTTCACC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTMQWFSLARLRAMLMKEFIQMWRDHITFAMMLIVPLMQLLLFGFAINNDPKSLPSALVALSNDHYTRAMISALETTNYY
RFDHVVHSAAEADALLANGSVSFVVTIPSDFARRVDAGDRPQLLIEADATDPSVASGAISTLSTVASQALLREQGRQAEA
ENASRSQLEVVVHRRYNPEGISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPATPAEIMLGKILPYLAV
GGVQMVVVLVAAKLIFGVPFVGSLTLLLSSVLIFVLSLVLLGYTISTVSRTQMQAMQLTFFFFLPSLMLSGFMFPFRGMP
DWAQALGNIFPLTYFLRIVRAVMLKGAGLADIAGEVMALILFVFLFAGLALLRFRRTLD

Sequences:

>Translated_379_residues
MTMQWFSLARLRAMLMKEFIQMWRDHITFAMMLIVPLMQLLLFGFAINNDPKSLPSALVALSNDHYTRAMISALETTNYY
RFDHVVHSAAEADALLANGSVSFVVTIPSDFARRVDAGDRPQLLIEADATDPSVASGAISTLSTVASQALLREQGRQAEA
ENASRSQLEVVVHRRYNPEGISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPATPAEIMLGKILPYLAV
GGVQMVVVLVAAKLIFGVPFVGSLTLLLSSVLIFVLSLVLLGYTISTVSRTQMQAMQLTFFFFLPSLMLSGFMFPFRGMP
DWAQALGNIFPLTYFLRIVRAVMLKGAGLADIAGEVMALILFVFLFAGLALLRFRRTLD
>Mature_378_residues
TMQWFSLARLRAMLMKEFIQMWRDHITFAMMLIVPLMQLLLFGFAINNDPKSLPSALVALSNDHYTRAMISALETTNYYR
FDHVVHSAAEADALLANGSVSFVVTIPSDFARRVDAGDRPQLLIEADATDPSVASGAISTLSTVASQALLREQGRQAEAE
NASRSQLEVVVHRRYNPEGISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPATPAEIMLGKILPYLAVG
GVQMVVVLVAAKLIFGVPFVGSLTLLLSSVLIFVLSLVLLGYTISTVSRTQMQAMQLTFFFFLPSLMLSGFMFPFRGMPD
WAQALGNIFPLTYFLRIVRAVMLKGAGLADIAGEVMALILFVFLFAGLALLRFRRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=382, Percent_Identity=30.1047120418848, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=27.3712737127371, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI48994943, Length=375, Percent_Identity=27.4666666666667, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI226510979, Length=364, Percent_Identity=29.6703296703297, Blast_Score=121, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24650855, Length=412, Percent_Identity=23.5436893203883, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24650853, Length=412, Percent_Identity=23.5436893203883, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI85725260, Length=417, Percent_Identity=22.7817745803357, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85725262, Length=417, Percent_Identity=22.7817745803357, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41792; Mature: 41661

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQWFSLARLRAMLMKEFIQMWRDHITFAMMLIVPLMQLLLFGFAINNDPKSLPSALVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LSNDHYTRAMISALETTNYYRFDHVVHSAAEADALLANGSVSFVVTIPSDFARRVDAGDR
HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHCCCCCC
PQLLIEADATDPSVASGAISTLSTVASQALLREQGRQAEAENASRSQLEVVVHRRYNPEG
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCCC
ISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPATPAEIMLGKILPYLAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHH
GGVQMVVVLVAAKLIFGVPFVGSLTLLLSSVLIFVLSLVLLGYTISTVSRTQMQAMQLTF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFFLPSLMLSGFMFPFRGMPDWAQALGNIFPLTYFLRIVRAVMLKGAGLADIAGEVMALI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LFVFLFAGLALLRFRRTLD
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TMQWFSLARLRAMLMKEFIQMWRDHITFAMMLIVPLMQLLLFGFAINNDPKSLPSALVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LSNDHYTRAMISALETTNYYRFDHVVHSAAEADALLANGSVSFVVTIPSDFARRVDAGDR
HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHCCCCCC
PQLLIEADATDPSVASGAISTLSTVASQALLREQGRQAEAENASRSQLEVVVHRRYNPEG
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHCCCCCC
ISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPATPAEIMLGKILPYLAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHH
GGVQMVVVLVAAKLIFGVPFVGSLTLLLSSVLIFVLSLVLLGYTISTVSRTQMQAMQLTF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFFLPSLMLSGFMFPFRGMPDWAQALGNIFPLTYFLRIVRAVMLKGAGLADIAGEVMALI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LFVFLFAGLALLRFRRTLD
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]