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The map label for this gene is yaiS [C]

Identifier: 225686248

GI number: 225686248

Start: 409250

End: 409906

Strand: Direct

Name: yaiS [C]

Synonym: BMEA_B0419

Alternate gene names: 225686248

Gene position: 409250-409906 (Clockwise)

Preceding gene: 225686247

Following gene: 225686249

Centisome position: 34.52

GC content: 57.99

Gene sequence:

>657_bases
ATGATCGACCTGTGCGCGCTGGCAAATCCGGGCCGTCCGCTTGAACTTTTGTGCCTTGGCGCACATTCCGACGATATCGA
GATCGGTTGCGGCGGTACGCTTCTGCATCTGATCGAAACCGGCACACCGCTGCATGTGGAATGGTGTGTCTTGTCAGGAA
ACGAACAAAGGCGTGCGGAAGCGGAGGCTTCGGCGCGGGATTTTTTGCGCGGCATGGATCGTTTCCAGCTTCATGTCGCT
TCCTTCGCGGACAGCTATTTTCCGGCTGAAAGCCGGGCCATCAAGGAATGGCTTATCGCGCAGCGCGGACGTGGCCAGCC
GGATATCGTGTTTACCCATTACCATGGCGATGCCCATCAGGACCACAGGACGGTCAACGAATTGACCTGGAACCTGTTCC
GCGACCAGCTTATTCTCGAATATGAAATACCCAAATGGGATGGCGATCTTGGCCGGCCCAATGCCTATTCGGCGCTGCCT
GCCTCGATCATGGAGCGCAAGATCGATCTCCTGATGAAGCATTTTGGCACACAGCGCTCGAAGGACTGGTTCGGCCCGGA
AACCTTCCGGGGGCTTGCCCGGCTGCGCGGCATGGAGTGCCGCGCACCTGAAACCTATGCCGAGGCATTTCACGCCCGCA
AGCTGCGGCTTTTCTAA

Upstream 100 bases:

>100_bases
TGCGCGACTGGCAGACGCTGGAGGATATGGTGGAGAAAGGCGATATGCCCTGGAAGAAACACAAGGCGGAACAGCGGGCC
GCCAATATTGCGATAGCACT

Downstream 100 bases:

>100_bases
AGCCTTTTCGGATGAGCTATCTACCGCTTTTGTTTGAATTTCCTTGCGAGAAAATCGGCATAAACTCATGGCTGCCGATA
AAATAAATCTGCCTGCCATA

Product: LmbE family protein

Products: NA

Alternate protein names: GlcNAc-PI De-N-Acetylase; GlcNAc-PI De-N-Acetylase Family Protein; LmbE-Like Protein; Deacetylase

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIDLCALANPGRPLELLCLGAHSDDIEIGCGGTLLHLIETGTPLHVEWCVLSGNEQRRAEAEASARDFLRGMDRFQLHVA
SFADSYFPAESRAIKEWLIAQRGRGQPDIVFTHYHGDAHQDHRTVNELTWNLFRDQLILEYEIPKWDGDLGRPNAYSALP
ASIMERKIDLLMKHFGTQRSKDWFGPETFRGLARLRGMECRAPETYAEAFHARKLRLF

Sequences:

>Translated_218_residues
MIDLCALANPGRPLELLCLGAHSDDIEIGCGGTLLHLIETGTPLHVEWCVLSGNEQRRAEAEASARDFLRGMDRFQLHVA
SFADSYFPAESRAIKEWLIAQRGRGQPDIVFTHYHGDAHQDHRTVNELTWNLFRDQLILEYEIPKWDGDLGRPNAYSALP
ASIMERKIDLLMKHFGTQRSKDWFGPETFRGLARLRGMECRAPETYAEAFHARKLRLF
>Mature_218_residues
MIDLCALANPGRPLELLCLGAHSDDIEIGCGGTLLHLIETGTPLHVEWCVLSGNEQRRAEAEASARDFLRGMDRFQLHVA
SFADSYFPAESRAIKEWLIAQRGRGQPDIVFTHYHGDAHQDHRTVNELTWNLFRDQLILEYEIPKWDGDLGRPNAYSALP
ASIMERKIDLLMKHFGTQRSKDWFGPETFRGLARLRGMECRAPETYAEAFHARKLRLF

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24904; Mature: 24904

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLCALANPGRPLELLCLGAHSDDIEIGCGGTLLHLIETGTPLHVEWCVLSGNEQRRAE
CCCEECCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHCCCCEEEEEEEECCCHHHHHH
AEASARDFLRGMDRFQLHVASFADSYFPAESRAIKEWLIAQRGRGQPDIVFTHYHGDAHQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCH
DHRTVNELTWNLFRDQLILEYEIPKWDGDLGRPNAYSALPASIMERKIDLLMKHFGTQRS
HHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KDWFGPETFRGLARLRGMECRAPETYAEAFHARKLRLF
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDLCALANPGRPLELLCLGAHSDDIEIGCGGTLLHLIETGTPLHVEWCVLSGNEQRRAE
CCCEECCCCCCCCEEEEEECCCCCCEEECCCHHHHHHHHCCCCEEEEEEEECCCHHHHHH
AEASARDFLRGMDRFQLHVASFADSYFPAESRAIKEWLIAQRGRGQPDIVFTHYHGDAHQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCH
DHRTVNELTWNLFRDQLILEYEIPKWDGDLGRPNAYSALPASIMERKIDLLMKHFGTQRS
HHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KDWFGPETFRGLARLRGMECRAPETYAEAFHARKLRLF
CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA