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The map label for this gene is yccM [C]

Identifier: 225686199

GI number: 225686199

Start: 344860

End: 346293

Strand: Direct

Name: yccM [C]

Synonym: BMEA_B0365

Alternate gene names: 225686199

Gene position: 344860-346293 (Clockwise)

Preceding gene: 225686198

Following gene: 225686202

Centisome position: 29.09

GC content: 60.11

Gene sequence:

>1434_bases
ATGGTTTCTGTCCCGGCCTCGCGCCCTGCAAACCGCCTGATTGCGGGAGAAGAAAAGCGCTTGCAGCGGGCTCTGGCCCG
CACAGGCCTCTGGCTGCGCGATCATCAGCGCGCAATCCGCGCCATTCAGTGGGTGATTATCGGGGCCTATGCGGGATTGC
TGATTATCCCGCTCATGACACCGATGCCCGATCGCCTGTCCCATATCTGGTCCAATGCGGTTCTGTTTGCCCAGTTCATG
TTCTGGGGCATCTGGTGGCCTTTCGTACTGGTGTCCATGGTGCTGATGGGCCGCACATGGTGCGGCGTATTCTGCCCGGA
AGGCGCTCTGGCGGAAGCTGCCAGCCGCCACGGCTATGGTCGCGCCACCCCGCGCTGGATCAAATGGAAAGGCTGGCCCT
TCGTCGCTTTTGCCTGCACCACGATCTATGGGCAGATGGTGAGCGTCTACCAATATCCAAAGCCGGTCATCATCGTGCTT
GGCGGCTCCACGCTTGCTGCAATGGCTGTGGGCTTCCTTTATGGCCGTGAGAAGCGCGTCTGGTGCCGCTATCTCTGCCC
GGTTAGTGGTGTGTTTGCCGTGCTGGCCAAGCTTGCTCCCGTATATTACCGGGTGGATCGCGAGACGTGGAACGATTGGG
AGCGCAAACCGGGCACACCGATGCCGCATGTCAATTGCGCGCCGCTGGTGCCGATCAAGACAATGCGCGGGGCTTCCGCC
TGCCACATGTGCGGGCGATGCGCGGGTTTCAAGGATGCTATCCAGCTTTCGGGGCGCTCACCTTCTTATGAAGTCGTCGA
GGTTGCAGGGGATGCCCCCAAACCATGGGAAAGCCTGCTTATCATTTTTGGCATGATGGGCATAGCCGCTGGCGCGTTCC
AGTGGGCATCCAGCCCTATCTATGTCGATGTCAAGCAATGGCTGGCCGAATGGCTGGTGGAGCACGGCGGCATCGCCATG
ATCCAGCCGCAGCTTCCCTGGTGGGTGCTGACCAATTATCCCGATCTCAACGACATGATGACACCGCTCGATGGTGGCTT
GATGATCGCCTATATTCTCGCTGTCGCTTGCATTACCAGCATTGCGGTGGGTGGGCTTGTGGCAATCGCCAATTGGGCGC
TTGGCGGCTGGAAGGCGGCGCGCTTCCACCATCTGGTGCAATGTCTTATCCCCATGGCGGGGTGCGGCGTGTTTCTCGGC
CTGTCGGCCACGACCGTGACACTTTTGAAAGCGGAAGATGTGCCTCTGGCTTTTGTGAGCGACCTGCGCATTCTTCTGCT
GTTGGGCGCCGTCGTCTGGTCGGCATGGCTCTTGTGGTCGGTCGCGCGCCGCTACACATCTTCGATGGCTCGCAGGCTTG
TTGCGACCGCCATGGGGGCGCTTGCGACGGGTGTAGCCGCATTCAATTGGGTATTGTTGTTCTGGATCTGGTGA

Upstream 100 bases:

>100_bases
ATGGTATGTTGGGTGGGCTTGTTTCGGGCTTGACGGGATATCGCGCAAGGCCGGTTCTCATCGAAGTTCTTGTTTTCTTC
GCCTATTGGACAATCGTATT

Downstream 100 bases:

>100_bases
TGGGGCTGCTGGCGCGGGCTGGCGAAGCCGCTTCATGCCACCTGTCAAATGAGAGAAGAAAACTGGAGCCGGTCACTGTA
CCGGCTCCAACGGTTCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein; Polyferredoxin; Polyferredoxin-Like Protein; Polyferredoxin-Like; Ferredoxin; Nitrogen Assimilation Regulatory Protein; Polyferredoxin Protein

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MVSVPASRPANRLIAGEEKRLQRALARTGLWLRDHQRAIRAIQWVIIGAYAGLLIIPLMTPMPDRLSHIWSNAVLFAQFM
FWGIWWPFVLVSMVLMGRTWCGVFCPEGALAEAASRHGYGRATPRWIKWKGWPFVAFACTTIYGQMVSVYQYPKPVIIVL
GGSTLAAMAVGFLYGREKRVWCRYLCPVSGVFAVLAKLAPVYYRVDRETWNDWERKPGTPMPHVNCAPLVPIKTMRGASA
CHMCGRCAGFKDAIQLSGRSPSYEVVEVAGDAPKPWESLLIIFGMMGIAAGAFQWASSPIYVDVKQWLAEWLVEHGGIAM
IQPQLPWWVLTNYPDLNDMMTPLDGGLMIAYILAVACITSIAVGGLVAIANWALGGWKAARFHHLVQCLIPMAGCGVFLG
LSATTVTLLKAEDVPLAFVSDLRILLLLGAVVWSAWLLWSVARRYTSSMARRLVATAMGALATGVAAFNWVLLFWIW

Sequences:

>Translated_477_residues
MVSVPASRPANRLIAGEEKRLQRALARTGLWLRDHQRAIRAIQWVIIGAYAGLLIIPLMTPMPDRLSHIWSNAVLFAQFM
FWGIWWPFVLVSMVLMGRTWCGVFCPEGALAEAASRHGYGRATPRWIKWKGWPFVAFACTTIYGQMVSVYQYPKPVIIVL
GGSTLAAMAVGFLYGREKRVWCRYLCPVSGVFAVLAKLAPVYYRVDRETWNDWERKPGTPMPHVNCAPLVPIKTMRGASA
CHMCGRCAGFKDAIQLSGRSPSYEVVEVAGDAPKPWESLLIIFGMMGIAAGAFQWASSPIYVDVKQWLAEWLVEHGGIAM
IQPQLPWWVLTNYPDLNDMMTPLDGGLMIAYILAVACITSIAVGGLVAIANWALGGWKAARFHHLVQCLIPMAGCGVFLG
LSATTVTLLKAEDVPLAFVSDLRILLLLGAVVWSAWLLWSVARRYTSSMARRLVATAMGALATGVAAFNWVLLFWIW
>Mature_477_residues
MVSVPASRPANRLIAGEEKRLQRALARTGLWLRDHQRAIRAIQWVIIGAYAGLLIIPLMTPMPDRLSHIWSNAVLFAQFM
FWGIWWPFVLVSMVLMGRTWCGVFCPEGALAEAASRHGYGRATPRWIKWKGWPFVAFACTTIYGQMVSVYQYPKPVIIVL
GGSTLAAMAVGFLYGREKRVWCRYLCPVSGVFAVLAKLAPVYYRVDRETWNDWERKPGTPMPHVNCAPLVPIKTMRGASA
CHMCGRCAGFKDAIQLSGRSPSYEVVEVAGDAPKPWESLLIIFGMMGIAAGAFQWASSPIYVDVKQWLAEWLVEHGGIAM
IQPQLPWWVLTNYPDLNDMMTPLDGGLMIAYILAVACITSIAVGGLVAIANWALGGWKAARFHHLVQCLIPMAGCGVFLG
LSATTVTLLKAEDVPLAFVSDLRILLLLGAVVWSAWLLWSVARRYTSSMARRLVATAMGALATGVAAFNWVLLFWIW

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52846; Mature: 52846

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVPASRPANRLIAGEEKRLQRALARTGLWLRDHQRAIRAIQWVIIGAYAGLLIIPLMT
CCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PMPDRLSHIWSNAVLFAQFMFWGIWWPFVLVSMVLMGRTWCGVFCPEGALAEAASRHGYG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCC
RATPRWIKWKGWPFVAFACTTIYGQMVSVYQYPKPVIIVLGGSTLAAMAVGFLYGREKRV
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHH
WCRYLCPVSGVFAVLAKLAPVYYRVDRETWNDWERKPGTPMPHVNCAPLVPIKTMRGASA
HHHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHH
CHMCGRCAGFKDAIQLSGRSPSYEVVEVAGDAPKPWESLLIIFGMMGIAAGAFQWASSPI
HHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
YVDVKQWLAEWLVEHGGIAMIQPQLPWWVLTNYPDLNDMMTPLDGGLMIAYILAVACITS
EEEHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
IAVGGLVAIANWALGGWKAARFHHLVQCLIPMAGCGVFLGLSATTVTLLKAEDVPLAFVS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHEEEEEECCCCCHHHHH
DLRILLLLGAVVWSAWLLWSVARRYTSSMARRLVATAMGALATGVAAFNWVLLFWIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
>Mature Secondary Structure
MVSVPASRPANRLIAGEEKRLQRALARTGLWLRDHQRAIRAIQWVIIGAYAGLLIIPLMT
CCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PMPDRLSHIWSNAVLFAQFMFWGIWWPFVLVSMVLMGRTWCGVFCPEGALAEAASRHGYG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCC
RATPRWIKWKGWPFVAFACTTIYGQMVSVYQYPKPVIIVLGGSTLAAMAVGFLYGREKRV
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHH
WCRYLCPVSGVFAVLAKLAPVYYRVDRETWNDWERKPGTPMPHVNCAPLVPIKTMRGASA
HHHHHCCHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCHH
CHMCGRCAGFKDAIQLSGRSPSYEVVEVAGDAPKPWESLLIIFGMMGIAAGAFQWASSPI
HHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
YVDVKQWLAEWLVEHGGIAMIQPQLPWWVLTNYPDLNDMMTPLDGGLMIAYILAVACITS
EEEHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
IAVGGLVAIANWALGGWKAARFHHLVQCLIPMAGCGVFLGLSATTVTLLKAEDVPLAFVS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHEEEEEECCCCCHHHHH
DLRILLLLGAVVWSAWLLWSVARRYTSSMARRLVATAMGALATGVAAFNWVLLFWIW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA