| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225631021
Identifier: 225631021
GI number: 225631021
Start: 1444218
End: 1444958
Strand: Direct
Name: 225631021
Synonym: WRi_013510
Alternate gene names: NA
Gene position: 1444218-1444958 (Clockwise)
Preceding gene: 225631015
Following gene: NA
Centisome position: 99.89
GC content: 35.9
Gene sequence:
>741_bases ATGGTGGCAATTCTAAATATAACAAAAGGCAAAAATAAAGTTATTGTGTCTGGATTAGCTGGAGCTTTATCAGCTTTAAT ATTTTTAACAGCAATCCACATTGCCGCAAAGATAGCCATTATCGTTTCTGCTGCTGCAGTTACTTACTTATTACTTTCGC TGATTCATAAAATAAGAACTAAAAAAGAACAGCCTGAAATTACTGGTGTTTCAGGAGAGAAAGTTTCAGAAGATGAAGGG TATAGCAGTGTTGATGAAGGTGAAGAAAAAGATACCGCAAAAGAACCAGAAAGAACTGAAACTGAGTTAGAAGAAGAAAT AATAAGGAAAAGAGCACAAGAACGCATGGAGAAAGGATCACTTGGTGGTCCTATAAATGCGTTTGGCGAACCAATTCATG TGACTATAGATGCTGAAAATAGTAATCCTGTTGATTATACAAAAACTATGGTAGTGCCTGAGGAAATTATTCTTAGCATG CTAAATGATAAAACTCTTACACAAAATAACTCTAGCTCTATAAAGGATCAGATGAAACCTCTTCCTGAGCACATGGATGT GCCTGGTAATCCACTTCCTGGGCAAGTGTTAAGCAATCTAGAGCTTGAATCTAAAAGCACGCAGAAACTATCTGCTTTAG ACTTGCTATTACAGTGCAAAAATGTAGATAATGATGTAAAAAAAATGCTAAAACAGCCAATTACCCAAAAGGGGTTTAAC GGATTAGGATTTGATAGATAG
Upstream 100 bases:
>100_bases TAGCTTTAAAACTTTATGCAAATAATTAAAATTTTCGCAAAATTGCAAGTATAAGAAAATTCCTGTATAATAATTCTAGA ACAGTATTTGAGAGGTTATT
Downstream 100 bases:
>100_bases TTGTTATATTAACCTCTCCATCTCATATTGAGGATCAGATGCAATGCCGTAGACCCTATTTGGCGGAGCAATTTTGTTCT CTATACCAAAAACCATACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MVAILNITKGKNKVIVSGLAGALSALIFLTAIHIAAKIAIIVSAAAVTYLLLSLIHKIRTKKEQPEITGVSGEKVSEDEG YSSVDEGEEKDTAKEPERTETELEEEIIRKRAQERMEKGSLGGPINAFGEPIHVTIDAENSNPVDYTKTMVVPEEIILSM LNDKTLTQNNSSSIKDQMKPLPEHMDVPGNPLPGQVLSNLELESKSTQKLSALDLLLQCKNVDNDVKKMLKQPITQKGFN GLGFDR
Sequences:
>Translated_246_residues MVAILNITKGKNKVIVSGLAGALSALIFLTAIHIAAKIAIIVSAAAVTYLLLSLIHKIRTKKEQPEITGVSGEKVSEDEG YSSVDEGEEKDTAKEPERTETELEEEIIRKRAQERMEKGSLGGPINAFGEPIHVTIDAENSNPVDYTKTMVVPEEIILSM LNDKTLTQNNSSSIKDQMKPLPEHMDVPGNPLPGQVLSNLELESKSTQKLSALDLLLQCKNVDNDVKKMLKQPITQKGFN GLGFDR >Mature_246_residues MVAILNITKGKNKVIVSGLAGALSALIFLTAIHIAAKIAIIVSAAAVTYLLLSLIHKIRTKKEQPEITGVSGEKVSEDEG YSSVDEGEEKDTAKEPERTETELEEEIIRKRAQERMEKGSLGGPINAFGEPIHVTIDAENSNPVDYTKTMVVPEEIILSM LNDKTLTQNNSSSIKDQMKPLPEHMDVPGNPLPGQVLSNLELESKSTQKLSALDLLLQCKNVDNDVKKMLKQPITQKGFN GLGFDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26872; Mature: 26872
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAILNITKGKNKVIVSGLAGALSALIFLTAIHIAAKIAIIVSAAAVTYLLLSLIHKIRT CEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KKEQPEITGVSGEKVSEDEGYSSVDEGEEKDTAKEPERTETELEEEIIRKRAQERMEKGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LGGPINAFGEPIHVTIDAENSNPVDYTKTMVVPEEIILSMLNDKTLTQNNSSSIKDQMKP CCCCHHHCCCCEEEEEECCCCCCCCHHHHEECHHHHHHHHHCCCCCCCCCCHHHHHHHHC LPEHMDVPGNPLPGQVLSNLELESKSTQKLSALDLLLQCKNVDNDVKKMLKQPITQKGFN CHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC GLGFDR CCCCCC >Mature Secondary Structure MVAILNITKGKNKVIVSGLAGALSALIFLTAIHIAAKIAIIVSAAAVTYLLLSLIHKIRT CEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KKEQPEITGVSGEKVSEDEGYSSVDEGEEKDTAKEPERTETELEEEIIRKRAQERMEKGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC LGGPINAFGEPIHVTIDAENSNPVDYTKTMVVPEEIILSMLNDKTLTQNNSSSIKDQMKP CCCCHHHCCCCEEEEEECCCCCCCCHHHHEECHHHHHHHHHCCCCCCCCCCHHHHHHHHC LPEHMDVPGNPLPGQVLSNLELESKSTQKLSALDLLLQCKNVDNDVKKMLKQPITQKGFN CHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC GLGFDR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA