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The map label for this gene is ykvO [H]

Identifier: 225630994

GI number: 225630994

Start: 1406723

End: 1407478

Strand: Direct

Name: ykvO [H]

Synonym: WRi_013190

Alternate gene names: 225630994

Gene position: 1406723-1407478 (Clockwise)

Preceding gene: 225630993

Following gene: 225630995

Centisome position: 97.29

GC content: 37.7

Gene sequence:

>756_bases
ATGGATCTCGCTAAGGAGAAAGAAATGGGTAAGTTAGAAGGTAAAGTAGCTTTAATCACCGGAGCTTCAGGTGGAGTAGG
CTCTGCTGTTGCAAAAAGGTTTATAAGAGAAGGTGCATGTGTGATTCTGATTTCAAGATCTCTTGATAATCTCAAGCCAC
TATATAATGAAATTGAAGAGCTTGAAGAATTTAAAGAAGGCTCTGTGAAACTAATTCAGCTTGATCTTTTAGACTTTGAG
AATGTAAAGATACTGACAAACATGATAGAAAGCCTGAAATTATCAGAATCTGGAGCACTTGATATATTAGTTGCGTGTGC
TGGAATTTTAGGCAAACTGAACCCCATTCATGACTGTGAGATTGAAGAGCTACAGAACGTAATGAATACAAATTTTACTG
CCAATTGGTACTTACTAAAAAACTTAGATCCAATGCTAAAAAAGTCTAATGCTGGAAGAGCGATATTCATGACCTCAGAA
GTGACACTTTCTCCTTCCTCTTATCCATATTGGATGCCGTATGCTGCAAGTAAAGTTGCACTAGAAATAATGGTGCAGAT
ATATGCATCTGAGACAAAACATACAAAATTATGTGTAAATGCTGTATACACGGAAGGACCTGTGGGTAGTGAGCAGGCAT
TTCCTGGATCTGAATTGGTGTCACCTGATAAACTAACAGATAAATTTGTGGAATTAGCTTCTGAAGACTGCAGCATATCA
GGAAAAATCTTACCGCTCAGCAAATCTCCCGAATAA

Upstream 100 bases:

>100_bases
GGAAGTTTAGGTGGTGTGGTAGTGTCATTACTATTTTTTTATATGCTAAGTTTGATTTTTATATATGGAGCAAAATTCAA
TTTTCAGCTAAAATATTTCA

Downstream 100 bases:

>100_bases
ATTACCATAGTATCTGCAAAGATACCGTTAAGCCCACAACTGTATGAACATTGTGATTTGAGAGTAATCTCCACTAGGAA
GGATGTCATCCCAGTGCCTC

Product: oxidoreductase, short-chain dehydrogenase/reductase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDLAKEKEMGKLEGKVALITGASGGVGSAVAKRFIREGACVILISRSLDNLKPLYNEIEELEEFKEGSVKLIQLDLLDFE
NVKILTNMIESLKLSESGALDILVACAGILGKLNPIHDCEIEELQNVMNTNFTANWYLLKNLDPMLKKSNAGRAIFMTSE
VTLSPSSYPYWMPYAASKVALEIMVQIYASETKHTKLCVNAVYTEGPVGSEQAFPGSELVSPDKLTDKFVELASEDCSIS
GKILPLSKSPE

Sequences:

>Translated_251_residues
MDLAKEKEMGKLEGKVALITGASGGVGSAVAKRFIREGACVILISRSLDNLKPLYNEIEELEEFKEGSVKLIQLDLLDFE
NVKILTNMIESLKLSESGALDILVACAGILGKLNPIHDCEIEELQNVMNTNFTANWYLLKNLDPMLKKSNAGRAIFMTSE
VTLSPSSYPYWMPYAASKVALEIMVQIYASETKHTKLCVNAVYTEGPVGSEQAFPGSELVSPDKLTDKFVELASEDCSIS
GKILPLSKSPE
>Mature_251_residues
MDLAKEKEMGKLEGKVALITGASGGVGSAVAKRFIREGACVILISRSLDNLKPLYNEIEELEEFKEGSVKLIQLDLLDFE
NVKILTNMIESLKLSESGALDILVACAGILGKLNPIHDCEIEELQNVMNTNFTANWYLLKNLDPMLKKSNAGRAIFMTSE
VTLSPSSYPYWMPYAASKVALEIMVQIYASETKHTKLCVNAVYTEGPVGSEQAFPGSELVSPDKLTDKFVELASEDCSIS
GKILPLSKSPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Escherichia coli, GI1787526, Length=212, Percent_Identity=32.0754716981132, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082100, Length=203, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787820, Length=155, Percent_Identity=28.3870967741935, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=199, Percent_Identity=29.6482412060301, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=210, Percent_Identity=28.0952380952381, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=30.4568527918782, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322227, Length=228, Percent_Identity=29.8245614035088, Blast_Score=62, Evalue=9e-11,
Organism=Drosophila melanogaster, GI23397609, Length=191, Percent_Identity=32.9842931937173, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24644339, Length=191, Percent_Identity=32.4607329842932, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007236, Length=196, Percent_Identity=25, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007238, Length=196, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357673, Length=198, Percent_Identity=25.2525252525253, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27456; Mature: 27456

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLAKEKEMGKLEGKVALITGASGGVGSAVAKRFIREGACVILISRSLDNLKPLYNEIEE
CCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
LEEFKEGSVKLIQLDLLDFENVKILTNMIESLKLSESGALDILVACAGILGKLNPIHDCE
HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
IEELQNVMNTNFTANWYLLKNLDPMLKKSNAGRAIFMTSEVTLSPSSYPYWMPYAASKVA
HHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCEEEEEEEEEECCCCCCEECCHHHHHHH
LEIMVQIYASETKHTKLCVNAVYTEGPVGSEQAFPGSELVSPDKLTDKFVELASEDCSIS
HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
GKILPLSKSPE
CEEEECCCCCC
>Mature Secondary Structure
MDLAKEKEMGKLEGKVALITGASGGVGSAVAKRFIREGACVILISRSLDNLKPLYNEIEE
CCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
LEEFKEGSVKLIQLDLLDFENVKILTNMIESLKLSESGALDILVACAGILGKLNPIHDCE
HHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC
IEELQNVMNTNFTANWYLLKNLDPMLKKSNAGRAIFMTSEVTLSPSSYPYWMPYAASKVA
HHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCCEEEEEEEEEECCCCCCEECCHHHHHHH
LEIMVQIYASETKHTKLCVNAVYTEGPVGSEQAFPGSELVSPDKLTDKFVELASEDCSIS
HHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
GKILPLSKSPE
CEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]