Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630931

Identifier: 225630931

GI number: 225630931

Start: 1341595

End: 1342404

Strand: Reverse

Name: 225630931

Synonym: WRi_012480

Alternate gene names: NA

Gene position: 1342404-1341595 (Counterclockwise)

Preceding gene: 225630932

Following gene: 225630930

Centisome position: 92.84

GC content: 39.26

Gene sequence:

>810_bases
ATGCAGCAGCCAGAGATAATTGAAAAACTGAGCTACGAAGAAATATTCTCGAGAATGAAGGAAGAGTTAGTTCTTCGTGA
CCCAAGCTTTACTGCTCTTATTGAAAGCGATCCAGCAACAAAAATTATGGAAATAGCGGCCTGGAGAGAGCTTTTGCTAA
GAAAGAGGGTTAATGAAGCAGCAAAAGCAAATCTGCTCCGTTTTGCAACAGGAATAGACCTTGATCACCTAGCTGAATTT
TATGGCGTTGAGCGAAAAGGTGAAGAAGATGATGAACGATTTAGAAAAAGAATCAAGGCAAAAATAGAGGGCTGGAGCAC
AGGAGGTAGCAAGGAGCACTACCGCTTTCATGCGCTTTCAGCAGATAGCAGAGTTAAGGATGCGCTGGTTGAATCAAAAG
TGCCAGGGAGTGTAGAGATCTCGATTTTATCCACGGAGTTATCCACAAATGGCATAGCATCTGAAGAACTACTGGATATT
GTAGGAAAGCAAGTCACCAGGGATGATATAAGGGTATTAACAGATACGATAACAGTAGTTGGTTGCAATATTATTGAAAT
AAATATCCACAGCAGAATTAGTATTAAAAGACCAGATATTGTTGAAACAGTGAAGAAAAGATTTATAGAAAAATTTGAAA
CAACGAAAAGATTGGGATGGAGTGTAACAAGGGCGTGGATTATAGCAAATCTATTTATAGAAGGAGTGGAAAACGTGGAA
TTAATAGAGCCAAGAAAAGATGTTGTGGTAATGGGGAATGAGTGCGTTTGTTTAGGCAAGCTAGAAATCGAATTAATGGG
CAAAAGCTAA

Upstream 100 bases:

>100_bases
AAATCACAGAAGTAAAAGAAGGGAGAGTAACATTGGATTTAGAAGGTGTCTATCTTTCAGAAGGTAAGTTCATAAATATT
AATGGAGTAGTTGTTTAAAA

Downstream 100 bases:

>100_bases
TGTTACTTCCACCTAATAGCACAAAAGAAGAAAGAGCCATAGTAGAGGCTATCGATTACAAAGTTGATCCAAGCAGGATA
AAAGGATTTAAGTTTAATTC

Product: baseplate assembly protein J, putative

Products: NA

Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Phage Baseplate-Like Protein; Bacteriophage Baseplate Assembly Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MQQPEIIEKLSYEEIFSRMKEELVLRDPSFTALIESDPATKIMEIAAWRELLLRKRVNEAAKANLLRFATGIDLDHLAEF
YGVERKGEEDDERFRKRIKAKIEGWSTGGSKEHYRFHALSADSRVKDALVESKVPGSVEISILSTELSTNGIASEELLDI
VGKQVTRDDIRVLTDTITVVGCNIIEINIHSRISIKRPDIVETVKKRFIEKFETTKRLGWSVTRAWIIANLFIEGVENVE
LIEPRKDVVVMGNECVCLGKLEIELMGKS

Sequences:

>Translated_269_residues
MQQPEIIEKLSYEEIFSRMKEELVLRDPSFTALIESDPATKIMEIAAWRELLLRKRVNEAAKANLLRFATGIDLDHLAEF
YGVERKGEEDDERFRKRIKAKIEGWSTGGSKEHYRFHALSADSRVKDALVESKVPGSVEISILSTELSTNGIASEELLDI
VGKQVTRDDIRVLTDTITVVGCNIIEINIHSRISIKRPDIVETVKKRFIEKFETTKRLGWSVTRAWIIANLFIEGVENVE
LIEPRKDVVVMGNECVCLGKLEIELMGKS
>Mature_269_residues
MQQPEIIEKLSYEEIFSRMKEELVLRDPSFTALIESDPATKIMEIAAWRELLLRKRVNEAAKANLLRFATGIDLDHLAEF
YGVERKGEEDDERFRKRIKAKIEGWSTGGSKEHYRFHALSADSRVKDALVESKVPGSVEISILSTELSTNGIASEELLDI
VGKQVTRDDIRVLTDTITVVGCNIIEINIHSRISIKRPDIVETVKKRFIEKFETTKRLGWSVTRAWIIANLFIEGVENVE
LIEPRKDVVVMGNECVCLGKLEIELMGKS

Specific function: Unknown

COG id: COG3948

COG function: function code R; Phage-related baseplate assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30601; Mature: 30601

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPEIIEKLSYEEIFSRMKEELVLRDPSFTALIESDPATKIMEIAAWRELLLRKRVNEA
CCCHHHHHHCCHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AKANLLRFATGIDLDHLAEFYGVERKGEEDDERFRKRIKAKIEGWSTGGSKEHYRFHALS
HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
ADSRVKDALVESKVPGSVEISILSTELSTNGIASEELLDIVGKQVTRDDIRVLTDTITVV
CCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEE
GCNIIEINIHSRISIKRPDIVETVKKRFIEKFETTKRLGWSVTRAWIIANLFIEGVENVE
ECEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCE
LIEPRKDVVVMGNECVCLGKLEIELMGKS
EECCCCCEEEECCCEEEEEEEEEEEECCC
>Mature Secondary Structure
MQQPEIIEKLSYEEIFSRMKEELVLRDPSFTALIESDPATKIMEIAAWRELLLRKRVNEA
CCCHHHHHHCCHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AKANLLRFATGIDLDHLAEFYGVERKGEEDDERFRKRIKAKIEGWSTGGSKEHYRFHALS
HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
ADSRVKDALVESKVPGSVEISILSTELSTNGIASEELLDIVGKQVTRDDIRVLTDTITVV
CCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHEE
GCNIIEINIHSRISIKRPDIVETVKKRFIEKFETTKRLGWSVTRAWIIANLFIEGVENVE
ECEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCE
LIEPRKDVVVMGNECVCLGKLEIELMGKS
EECCCCCEEEECCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA