| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630918
Identifier: 225630918
GI number: 225630918
Start: 1327502
End: 1328725
Strand: Direct
Name: 225630918
Synonym: WRi_012340
Alternate gene names: NA
Gene position: 1327502-1328725 (Clockwise)
Preceding gene: 225630917
Following gene: 225630919
Centisome position: 91.81
GC content: 30.15
Gene sequence:
>1224_bases ATGATAAAAGAAATTGAAGAACTAATAAAAATTGTTGGTAAGGGTAATTTATTAGAGACGTTATTTATTTTTTTAGGTAG CTTTCAACATGCTGACTTAGGTCGTTTTATGGATCACAGAAATCATTTTGGTTTGTCTGAATTCATTAGAAAAAAAGAGG AACCATTAGATAAATATTTTAACTTAAAATTTAGTCTACAAGGGCTGTTTTTAATTTATGCTCAAGCTTATCGAATTCTA AGTGAAAACAATAACCTGAATACTAAAGATGTCATAGATAAAATATATGAAGTTATTAAAGGATCTGAGTTAAATGAATA TATAAATGAAGTAGTAGATGGAAGAAAATTAGATTTACTTAACATCTTAGCAAATCCAAAGAGAGAACCAATATTTAAAA CAGAAGAAGATTTTGAAAATAAAGTACTCATTGGTCTTAGAAAGTTACTAAGTGAAGGAAATACATTAAACAAATATGAC AGAGAATTTGCATTAAATAAGTGCGTTATCAGCAGCTATTATTCCATTCATGACATAAAAGCAGATAAAGATATAGCATT GTTCTTTTCTTTGGGTGGTCACTATAAAGAACTTTCGTCATCTAACAAAACAGTAAAAAGAGAAGTATTAGAGATATGTG AGAATCAGTTAATAGAGAGCTATATAATGTTCTTAGCTGGCAAACTACACATGATCGGATTATCAAGTAGAGATAAATAT ACAATCGACCATGAGAATGTGGATCGGCAAGAGAAAGCATTGAAAATGGATGGATTAATATATCCTATAAATACAAAAAA CACCCTAGAGCAACTGTTAAAAAACCAAAATAGTGATGAATTTGAACAATTAATAACGAGCCCTGATAATATATACTACT CAGTGCTGCAAGAAGAGAATGAATGTAGGCCAAATCCTATCACCAGCAAGAAAAAAGAAAAAGACCATAAAAACACAGTC TGTAAACTTATTTTAGGTATGTTTGTATTATCTGTTGGGTTATACGTTGCTGATTATTTCTTTATGGAGCAAAAATTATT TAATCCAATAAAAGGTGTCCTACCACAGGATAATTTTGTTAATCTAGTAATTGCTGCAGTGCTTACTATCGTAATAGTAT ATGCCTTATTTCAATTATTGAAACCACCACAGGAACCACCACTTTCAACAGTCAATAAGATGATGAATGAAAATTTAGGA CCGCTCCATGCAAAACAAGCTTAG
Upstream 100 bases:
>100_bases TTTCTACTTAGTTTGGGTTATGCAAGAAGTCTAATAACATTTGTTGCTATTTTGCCATGTATCCCTTATACTATAAAGTA GAACATTATGGGTTTCAGCA
Downstream 100 bases:
>100_bases AACTACATAAATGTAGCAACTTAAAAGTACATATTGTATAATGCTTATTCTTAAGTTAAGAGGTAATTTATGGATTTAAG TAAAATAACAGCGGGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MIKEIEELIKIVGKGNLLETLFIFLGSFQHADLGRFMDHRNHFGLSEFIRKKEEPLDKYFNLKFSLQGLFLIYAQAYRIL SENNNLNTKDVIDKIYEVIKGSELNEYINEVVDGRKLDLLNILANPKREPIFKTEEDFENKVLIGLRKLLSEGNTLNKYD REFALNKCVISSYYSIHDIKADKDIALFFSLGGHYKELSSSNKTVKREVLEICENQLIESYIMFLAGKLHMIGLSSRDKY TIDHENVDRQEKALKMDGLIYPINTKNTLEQLLKNQNSDEFEQLITSPDNIYYSVLQEENECRPNPITSKKKEKDHKNTV CKLILGMFVLSVGLYVADYFFMEQKLFNPIKGVLPQDNFVNLVIAAVLTIVIVYALFQLLKPPQEPPLSTVNKMMNENLG PLHAKQA
Sequences:
>Translated_407_residues MIKEIEELIKIVGKGNLLETLFIFLGSFQHADLGRFMDHRNHFGLSEFIRKKEEPLDKYFNLKFSLQGLFLIYAQAYRIL SENNNLNTKDVIDKIYEVIKGSELNEYINEVVDGRKLDLLNILANPKREPIFKTEEDFENKVLIGLRKLLSEGNTLNKYD REFALNKCVISSYYSIHDIKADKDIALFFSLGGHYKELSSSNKTVKREVLEICENQLIESYIMFLAGKLHMIGLSSRDKY TIDHENVDRQEKALKMDGLIYPINTKNTLEQLLKNQNSDEFEQLITSPDNIYYSVLQEENECRPNPITSKKKEKDHKNTV CKLILGMFVLSVGLYVADYFFMEQKLFNPIKGVLPQDNFVNLVIAAVLTIVIVYALFQLLKPPQEPPLSTVNKMMNENLG PLHAKQA >Mature_407_residues MIKEIEELIKIVGKGNLLETLFIFLGSFQHADLGRFMDHRNHFGLSEFIRKKEEPLDKYFNLKFSLQGLFLIYAQAYRIL SENNNLNTKDVIDKIYEVIKGSELNEYINEVVDGRKLDLLNILANPKREPIFKTEEDFENKVLIGLRKLLSEGNTLNKYD REFALNKCVISSYYSIHDIKADKDIALFFSLGGHYKELSSSNKTVKREVLEICENQLIESYIMFLAGKLHMIGLSSRDKY TIDHENVDRQEKALKMDGLIYPINTKNTLEQLLKNQNSDEFEQLITSPDNIYYSVLQEENECRPNPITSKKKEKDHKNTV CKLILGMFVLSVGLYVADYFFMEQKLFNPIKGVLPQDNFVNLVIAAVLTIVIVYALFQLLKPPQEPPLSTVNKMMNENLG PLHAKQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46991; Mature: 46991
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEIEELIKIVGKGNLLETLFIFLGSFQHADLGRFMDHRNHFGLSEFIRKKEEPLDKYF CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NLKFSLQGLFLIYAQAYRILSENNNLNTKDVIDKIYEVIKGSELNEYINEVVDGRKLDLL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH NILANPKREPIFKTEEDFENKVLIGLRKLLSEGNTLNKYDREFALNKCVISSYYSIHDIK HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ADKDIALFFSLGGHYKELSSSNKTVKREVLEICENQLIESYIMFLAGKLHMIGLSSRDKY CCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCE TIDHENVDRQEKALKMDGLIYPINTKNTLEQLLKNQNSDEFEQLITSPDNIYYSVLQEEN ECCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCC ECRPNPITSKKKEKDHKNTVCKLILGMFVLSVGLYVADYFFMEQKLFNPIKGVLPQDNFV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH NLVIAAVLTIVIVYALFQLLKPPQEPPLSTVNKMMNENLGPLHAKQA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIKEIEELIKIVGKGNLLETLFIFLGSFQHADLGRFMDHRNHFGLSEFIRKKEEPLDKYF CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH NLKFSLQGLFLIYAQAYRILSENNNLNTKDVIDKIYEVIKGSELNEYINEVVDGRKLDLL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH NILANPKREPIFKTEEDFENKVLIGLRKLLSEGNTLNKYDREFALNKCVISSYYSIHDIK HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ADKDIALFFSLGGHYKELSSSNKTVKREVLEICENQLIESYIMFLAGKLHMIGLSSRDKY CCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCE TIDHENVDRQEKALKMDGLIYPINTKNTLEQLLKNQNSDEFEQLITSPDNIYYSVLQEEN ECCCCCCCHHHHHHHHCCEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCC ECRPNPITSKKKEKDHKNTVCKLILGMFVLSVGLYVADYFFMEQKLFNPIKGVLPQDNFV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH NLVIAAVLTIVIVYALFQLLKPPQEPPLSTVNKMMNENLGPLHAKQA HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA