| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630903
Identifier: 225630903
GI number: 225630903
Start: 1311404
End: 1312228
Strand: Reverse
Name: 225630903
Synonym: WRi_012190
Alternate gene names: NA
Gene position: 1312228-1311404 (Counterclockwise)
Preceding gene: 225630908
Following gene: 225630902
Centisome position: 90.76
GC content: 37.94
Gene sequence:
>825_bases ATGGCCCAGACATCTAAAGAAAGTGTTGAAAAAAAGTTTAAAGATGTTTTTGAACGTTCTCCAGGTGCTTTTCCAGAAGG TACCTCATTAGAAAAGAAGGTTAATTATATCGCAAAAGGAACAAAGGCTCTAAAAGCTGTGAAAAGTAAGGAGCTTGAGA ACAAAATGAAAAATGTTGCAGAATTGAGTCAGAAATTTGAAAGTCAAAAAGGACGTGCAGATGAAAAAGTACGTCAAGAT TTTGAAAGAATTGCTGAGCTTGACCAACAATATAAAGGGAAGGGCATCTTCACAAGTGAAAAAGTTGCAGAGCCAAAAAG TGACAAAAAACTCCAAGACACTCCGAGAAAAACTACAACAGCAGTTAAAGACCTTGAACATAATACACAAAAAAAGACTA CTGAAGCTTCTGTGCAAACAGCATCAGAGCACGATTCACAAACCGTTAATCCCTCAGTGAGCAAGAGTTCTGTAAAAGAG AAGCTCAACACTGAGCCGGACAAAAAAGATAACACGCCTCAACCACAAGAAAATCAAAAAGAAGAAGGGTTTTTGAGTCT TCTGAAGCGCTTTGTTAAGAAAATATTAGAAAAATTTTTAGGTGAAGGTGAAAAGGATGTAGAGAATGCTCGTGGCATGA AAGAAGATGCTCAAAGAGATACGTCAAATAACGAAGAGCAACAAAAGAGTAAGCAGCTTGATGAAATTTTAAAGGACAAA AGTGTAAGCGAGGGTTTGAAGCAGGCAACAAAGCTTGAGAACCCGGCAATAACGCCTGTTAATACTCCTAAAGTGAATGA AGTAAACACGGGTCGTGAAAGGTGA
Upstream 100 bases:
>100_bases ACGCCCTTGATAAACACTTTTTACCACAAGTTATGTTAACTGTTTTTTATATAATTAGCTAATATACTGATTATATGATA TGTTTTAATAGGTAACAGGT
Downstream 100 bases:
>100_bases TCCGCTTTCAAGCTTCATTATACCGCCACGAACCGTCATACCGCCGCGGTATCTCATCCGCTAACAAGTAGCGGGATGAC GATTGTCAGGGTGTCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAQTSKESVEKKFKDVFERSPGAFPEGTSLEKKVNYIAKGTKALKAVKSKELENKMKNVAELSQKFESQKGRADEKVRQD FERIAELDQQYKGKGIFTSEKVAEPKSDKKLQDTPRKTTTAVKDLEHNTQKKTTEASVQTASEHDSQTVNPSVSKSSVKE KLNTEPDKKDNTPQPQENQKEEGFLSLLKRFVKKILEKFLGEGEKDVENARGMKEDAQRDTSNNEEQQKSKQLDEILKDK SVSEGLKQATKLENPAITPVNTPKVNEVNTGRER
Sequences:
>Translated_274_residues MAQTSKESVEKKFKDVFERSPGAFPEGTSLEKKVNYIAKGTKALKAVKSKELENKMKNVAELSQKFESQKGRADEKVRQD FERIAELDQQYKGKGIFTSEKVAEPKSDKKLQDTPRKTTTAVKDLEHNTQKKTTEASVQTASEHDSQTVNPSVSKSSVKE KLNTEPDKKDNTPQPQENQKEEGFLSLLKRFVKKILEKFLGEGEKDVENARGMKEDAQRDTSNNEEQQKSKQLDEILKDK SVSEGLKQATKLENPAITPVNTPKVNEVNTGRER >Mature_273_residues AQTSKESVEKKFKDVFERSPGAFPEGTSLEKKVNYIAKGTKALKAVKSKELENKMKNVAELSQKFESQKGRADEKVRQDF ERIAELDQQYKGKGIFTSEKVAEPKSDKKLQDTPRKTTTAVKDLEHNTQKKTTEASVQTASEHDSQTVNPSVSKSSVKEK LNTEPDKKDNTPQPQENQKEEGFLSLLKRFVKKILEKFLGEGEKDVENARGMKEDAQRDTSNNEEQQKSKQLDEILKDKS VSEGLKQATKLENPAITPVNTPKVNEVNTGRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30929; Mature: 30798
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTSKESVEKKFKDVFERSPGAFPEGTSLEKKVNYIAKGTKALKAVKSKELENKMKNVA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSQKFESQKGRADEKVRQDFERIAELDQQYKGKGIFTSEKVAEPKSDKKLQDTPRKTTT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCCHHHHH AVKDLEHNTQKKTTEASVQTASEHDSQTVNPSVSKSSVKEKLNTEPDKKDNTPQPQENQK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCH EEGFLSLLKRFVKKILEKFLGEGEKDVENARGMKEDAQRDTSNNEEQQKSKQLDEILKDK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH SVSEGLKQATKLENPAITPVNTPKVNEVNTGRER HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQTSKESVEKKFKDVFERSPGAFPEGTSLEKKVNYIAKGTKALKAVKSKELENKMKNVA CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSQKFESQKGRADEKVRQDFERIAELDQQYKGKGIFTSEKVAEPKSDKKLQDTPRKTTT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHCCHHHHH AVKDLEHNTQKKTTEASVQTASEHDSQTVNPSVSKSSVKEKLNTEPDKKDNTPQPQENQK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCH EEGFLSLLKRFVKKILEKFLGEGEKDVENARGMKEDAQRDTSNNEEQQKSKQLDEILKDK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH SVSEGLKQATKLENPAITPVNTPKVNEVNTGRER HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA