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The map label for this gene is petA [H]

Identifier: 225630868

GI number: 225630868

Start: 1270884

End: 1271483

Strand: Reverse

Name: petA [H]

Synonym: WRi_011790

Alternate gene names: 225630868

Gene position: 1271483-1270884 (Counterclockwise)

Preceding gene: 225630869

Following gene: 225630866

Centisome position: 87.94

GC content: 40.67

Gene sequence:

>600_bases
ATGGACAAAAAATTGACTAAAAATAAAAAACCACTGGCAAACAAAGAGGATAAAAAAACACCTCCCGTTAAAGATCTTAC
TAAAAATAAGAGTAGGAGAGATTTTATAACATTAACTACATGCGCTATGGCAGGTATAGGAGCTGTAAGTGGGCTTTGGC
CACTGGTTAAATCTATGAATCCTTCTGCTGAAGTTCTAGCAACTTCCACAGTGGAAGTGAATTTGTCTGGAATTCAGGAA
GGACACGGAGTAAAAGTAAAGTGGCAAGGTAAACCAGTATTCATTCGTAGACGCACAAAGCAAGAAATTGAGGCTGCAAG
AGCTGTGAATGTGAAGAGCTTGAGGGATCCTCAATTAGATGAGCAGAGAGTATACGAAGGAAAAGACGAATGGTTAATCA
TGATCGGAATATGTACACATCTTGGGTGTGTACCGGTTGACCACGCTACAAGAGATGGTAATGGTTGGTTCTGTCCTTGC
CACGGTTCATATTATGACACATCAGGCCGAGTGATTGGGGGTCCTGCACCAAAAAATATGGTTGTACCTGACTATTTTTT
TCCCAGTGAGAATGTTGTAGTAATTGGCAAGAAGGCTTAA

Upstream 100 bases:

>100_bases
CTTCTCAACTGTAGTACAGATTAAACAAAAAGCGCAAGTTTTTGTTGATTAATACGCAGTATTTAATTTAAAATATATAC
TTATGGCTGAGTAAAGATCA

Downstream 100 bases:

>100_bases
CGGAACTCGTTAAAAAAAACTCACAGGATCAACATCTATTATCACTGCAATACTCGAATTCAAGTTACAATTTTTAATCC
AATATTTCAGCTTTTTTTGT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDKKLTKNKKPLANKEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMNPSAEVLATSTVEVNLSGIQE
GHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKDEWLIMIGICTHLGCVPVDHATRDGNGWFCPC
HGSYYDTSGRVIGGPAPKNMVVPDYFFPSENVVVIGKKA

Sequences:

>Translated_199_residues
MDKKLTKNKKPLANKEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMNPSAEVLATSTVEVNLSGIQE
GHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKDEWLIMIGICTHLGCVPVDHATRDGNGWFCPC
HGSYYDTSGRVIGGPAPKNMVVPDYFFPSENVVVIGKKA
>Mature_199_residues
MDKKLTKNKKPLANKEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMNPSAEVLATSTVEVNLSGIQE
GHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKDEWLIMIGICTHLGCVPVDHATRDGNGWFCPC
HGSYYDTSGRVIGGPAPKNMVVPDYFFPSENVVVIGKKA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=171, Percent_Identity=47.3684210526316, Blast_Score=166, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17540418, Length=180, Percent_Identity=43.8888888888889, Blast_Score=150, Evalue=5e-37,
Organism=Saccharomyces cerevisiae, GI6320811, Length=190, Percent_Identity=47.3684210526316, Blast_Score=176, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24580896, Length=142, Percent_Identity=54.9295774647887, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI17864350, Length=92, Percent_Identity=44.5652173913043, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21992; Mature: 21992

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKLTKNKKPLANKEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMN
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC
PSAEVLATSTVEVNLSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLD
CCHHEEEEEEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCHHHCCCCCCC
EQRVYEGKDEWLIMIGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGGPAPKNM
HHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEECCCCEECCCCEEECCCCCCCC
VVPDYFFPSENVVVIGKKA
CCCCEECCCCCEEEEEECC
>Mature Secondary Structure
MDKKLTKNKKPLANKEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMN
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC
PSAEVLATSTVEVNLSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLD
CCHHEEEEEEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHCCHHHCCCCCCC
EQRVYEGKDEWLIMIGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGGPAPKNM
HHHHHCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEECCCCEECCCCEEECCCCCCCC
VVPDYFFPSENVVVIGKKA
CCCCEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]