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The map label for this gene is yceJ [H]

Identifier: 225630838

GI number: 225630838

Start: 1232044

End: 1232565

Strand: Direct

Name: yceJ [H]

Synonym: WRi_011440

Alternate gene names: 225630838

Gene position: 1232044-1232565 (Clockwise)

Preceding gene: 225630832

Following gene: 225630839

Centisome position: 85.21

GC content: 33.91

Gene sequence:

>522_bases
ATGGAAGACAATAAATATAGCCTAGGTTTAAGAGTTATCCATTGGTTGATGGCTGTTTTTATTATCGGTATGCTTTGCTC
TGGACTTTATATGAAAAGCTTACCACTTAGCAATGAAATTAAGTTCAACATATACGCTATTCATAAGGCTTGCGGTATCA
CTATTCTTGGACTAATCATAGTACGCATATTTTTTCGCGTCTTTACTTATGTTCCACCACTTCCAGCAAATTTTTCTCGG
TTTGTAATCAATACAAGTAAAGCAGTGCACTTTGGTTTATATTCTTTAATGGTGCTAATGCCACTATCTGGCTATGTCAT
GTCTTCTGCTTCTGGCAAACAGATCAAATATTTTTTTCATATCCCTTTGTTGATTAATCAAAACAAAGATCTAGCTAACA
CGGCTAACGAGCTACATTCGATGCTTGCATATTTTATGGTACTCTTTATAATCTTACATATACTTGGCGCTTTGAAGCAC
ACATTTATAGATAAGCAAAACATTTTTAAACGTATGATATAG

Upstream 100 bases:

>100_bases
AATTTGTATAGCTACATTGTCGGTAAATCTAAATTGCTTTAATAATTTTGATTGAAAAATAGTTTTTCTATTATATAAAT
GCTACTTTAGAGTAGTCAAA

Downstream 100 bases:

>100_bases
GTTATATGTTAAGTAGCCTCTGGAAAAAAGGAACAGATTTTCTTGGCAGTGAGTTTGCTATAATGGGTGGTGCTATGAGC
TGGGTTTCAGAGAGAAACTT

Product: cytochrome b561, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MEDNKYSLGLRVIHWLMAVFIIGMLCSGLYMKSLPLSNEIKFNIYAIHKACGITILGLIIVRIFFRVFTYVPPLPANFSR
FVINTSKAVHFGLYSLMVLMPLSGYVMSSASGKQIKYFFHIPLLINQNKDLANTANELHSMLAYFMVLFIILHILGALKH
TFIDKQNIFKRMI

Sequences:

>Translated_173_residues
MEDNKYSLGLRVIHWLMAVFIIGMLCSGLYMKSLPLSNEIKFNIYAIHKACGITILGLIIVRIFFRVFTYVPPLPANFSR
FVINTSKAVHFGLYSLMVLMPLSGYVMSSASGKQIKYFFHIPLLINQNKDLANTANELHSMLAYFMVLFIILHILGALKH
TFIDKQNIFKRMI
>Mature_173_residues
MEDNKYSLGLRVIHWLMAVFIIGMLCSGLYMKSLPLSNEIKFNIYAIHKACGITILGLIIVRIFFRVFTYVPPLPANFSR
FVINTSKAVHFGLYSLMVLMPLSGYVMSSASGKQIKYFFHIPLLINQNKDLANTANELHSMLAYFMVLFIILHILGALKH
TFIDKQNIFKRMI

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=173, Percent_Identity=33.5260115606936, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19825; Mature: 19825

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNKYSLGLRVIHWLMAVFIIGMLCSGLYMKSLPLSNEIKFNIYAIHKACGITILGLII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHH
VRIFFRVFTYVPPLPANFSRFVINTSKAVHFGLYSLMVLMPLSGYVMSSASGKQIKYFFH
HHHHHHHHHHCCCCCCCCHHHEEECCHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEE
IPLLINQNKDLANTANELHSMLAYFMVLFIILHILGALKHTFIDKQNIFKRMI
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MEDNKYSLGLRVIHWLMAVFIIGMLCSGLYMKSLPLSNEIKFNIYAIHKACGITILGLII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHH
VRIFFRVFTYVPPLPANFSRFVINTSKAVHFGLYSLMVLMPLSGYVMSSASGKQIKYFFH
HHHHHHHHHHCCCCCCCCHHHEEECCHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEE
IPLLINQNKDLANTANELHSMLAYFMVLFIILHILGALKHTFIDKQNIFKRMI
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]