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The map label for this gene is omp85 [H]

Identifier: 225630815

GI number: 225630815

Start: 1210902

End: 1213238

Strand: Reverse

Name: omp85 [H]

Synonym: WRi_011190

Alternate gene names: 225630815

Gene position: 1213238-1210902 (Counterclockwise)

Preceding gene: 225630816

Following gene: 225630814

Centisome position: 83.91

GC content: 31.54

Gene sequence:

>2337_bases
ATGAAAAAGCTATTTTATATACTGGTAGTGGTTTTTATTTCTTTTCCTGCCCTGCTTGTTGCTTTAGGAACTGCGGAAAA
AGTGCAGGTGAAAGATGTCAAATGTATTGGTAATGAGAGGGTAAGCAACCAGACAATAGGGTTCTATATAAAACTAAAAT
CTGGTGATTATATAAACGACGATGATATAGACTCAATTATAAAAGATCTATATAAAACAAAGTTATTTGCTAGTGTTAAT
GCTTACATAGATGATAAAAAAAATTTGGTAATAAAAATTCAAGAAAATCCACTAATTAACAAGATAATATTAAAGGGTAA
TAAGTTATTTAATAGCAAAGAGTTACTAAATAATGTGATTCAGTCAAAATCGCTAACTATTTTCACTGAAACAAAATTGC
AAAACGATTTAATGAATTTAATCACTACTTATAGAAATAACGGTAAGGTTGGCGTTAAAATTGAATATGAGTTGGAGAAG
CTCGATAGTAATAGGGTCAATCTAATTTTCAAAATAAAAGAAGGCAAAACCTCTAAAATTAAGGATATAAGATTTATAGG
CAATAAAAACTTTTCTGAAAATGAGCTAGAGCAAGTTATTAAAAGACATAGTAATGACATATTTAGTAAGTTATTTAGAG
CCATTTTTAAAGGCGAAAATCATTATTCACCGCAATATCTATTGATTAACACAGAATTGCTCGATCGTTTTTATTCGTCT
AAGGGATATATTCAAAATAATATTCAACCAATTGTTGAGGTTGATAATAACAATCAAACAGAGTTAACTTTTTTGATTGA
CGAAGGACAGCAGTATTTGTTTGGAAATAATGAGGTTAATATTGAAACTGAAATTCAGGATTTGAGCCTAAAAGAAGAAA
TATTGGATTTTATAACAGAGGAAAACGATAAGATATTTAATAGAGTTAAAATTAATAATACAGTAGAAAAAATAAACAAA
TATTTAAATGAAAAAGGATACATATTTGCAAAAGTTAATCCAGAGTATGCACAACGTGACAACGTTGTAGATGTAACCTA
CAGAGTGCTGCCGGGTAAAAAGATTTATATAAATCAAATTACAATTGATGGTAACGATCGCACTTTAGATAAAGTGATCA
GAAGTAAGCTAAGTGTAGCAGAAGGTGATGCATACAATATATCTGAGATTCAAAAGTCACGTAAAAAACTAATGAGTAGT
GATTTTTTTGAAACAGTGAAAGTAAATAGTTACGCAGTTAATGATAATGCAGTAAATCTTGACTTAAGTGTTAAAGAAAA
AAACACTACTTCGTTGTATTTGGGAGGAGGTGTGTCTCTTCCTGGTGGAGCATTGATTAAAATTGACCTCAAAGACCGTA
ATTTATTTGGTACTGGAAAAGAGCTCTCTTTTGCTCTTGAAAAAAGTCAATACGTATTTTCTACTGATTTAGAGTTTGTT
GAAAATAATTTTAATGATTCTGATACGTCACTAGGTGTAGACGTATTTTACGAAAAACAAGATAAGCCAAACACTACTTT
TGATAGTTGCGATATGGGATTTTTTACAAAGTTATCATATAAAGTCACAGAGAACTTAACTAATTCCCTTCGCTATTCTT
ATAAGTATAATCATATACACATGGATAATAAGGGTGGACAAGACACCGATATCTCTGAAATAATACTGGACCGAAAAGGT
GAACATCAGATTTCATCAGTGGGATACACGTTGGCATATAATAAACTGGATAACCTCTATACTCCAAAAGAAGGGTATTT
ACTGCGCTTAAGTCAGGATATTTCAGGATTGGGAGGAAACGTGAATTTCCTAAAATCTGAATTCTTATCTTTTTATACGC
ACCCTATATTAAGCAAAATTGACGATGATATAACGCTACGCTTTAAGATGGCAGCAGGTCATATTTTTTCTTATACTGAT
GAAAATCTAAACATTGGCCAGCACTTTTTTAAAGGGGGTAATGAGATTAGAGGGTTTGACCTTTCCGGTATTGGACCAAG
AGCAGAAGACAAAAATAAAAGCTCATTGGGAGGCAAAACTTATTTTAATCTAACACAGCAAGTGGATTTTCCTCTACCAA
AACTATATGACTATGCTGGTATCAAAGGCTCACTATTTGTTGACTATGCGACACTTTTTGGCTTAGATGATAAAAATAAG
AAGTATGAAGGGAAATACTATGATAGCAAGCTTGTGAGAGTGTCACCAGGTTTTGGCTTTTCAATGCTTTCTCCTTTTGG
TAGACTTAGATTGGATTTCGGGTTTCCTTTAGTAAAGGAATCTTATGATATAATACCATCACCAAATGTTAAATTTTCTA
TTGAAGCGGGGATTTGA

Upstream 100 bases:

>100_bases
AATGTCAAAAATATGCAGCTATTTTTGGTGCTTTAGTGTTGTTTTTGCTTATGGCAACTGGAATGTCAAATGATATTAGG
GATCTTTTTTGAAATAAAAT

Downstream 100 bases:

>100_bases
ATGAAATATATACAGTTATTTATATCAGTTATTGCCTTAATTATTTCCTTATTTGTGGGGTATAAGTTTGTAGGATATCA
ACCTCAGAACACAAAGGCTG

Product: surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 778; Mature: 778

Protein sequence:

>778_residues
MKKLFYILVVVFISFPALLVALGTAEKVQVKDVKCIGNERVSNQTIGFYIKLKSGDYINDDDIDSIIKDLYKTKLFASVN
AYIDDKKNLVIKIQENPLINKIILKGNKLFNSKELLNNVIQSKSLTIFTETKLQNDLMNLITTYRNNGKVGVKIEYELEK
LDSNRVNLIFKIKEGKTSKIKDIRFIGNKNFSENELEQVIKRHSNDIFSKLFRAIFKGENHYSPQYLLINTELLDRFYSS
KGYIQNNIQPIVEVDNNNQTELTFLIDEGQQYLFGNNEVNIETEIQDLSLKEEILDFITEENDKIFNRVKINNTVEKINK
YLNEKGYIFAKVNPEYAQRDNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNISEIQKSRKKLMSS
DFFETVKVNSYAVNDNAVNLDLSVKEKNTTSLYLGGGVSLPGGALIKIDLKDRNLFGTGKELSFALEKSQYVFSTDLEFV
ENNFNDSDTSLGVDVFYEKQDKPNTTFDSCDMGFFTKLSYKVTENLTNSLRYSYKYNHIHMDNKGGQDTDISEIILDRKG
EHQISSVGYTLAYNKLDNLYTPKEGYLLRLSQDISGLGGNVNFLKSEFLSFYTHPILSKIDDDITLRFKMAAGHIFSYTD
ENLNIGQHFFKGGNEIRGFDLSGIGPRAEDKNKSSLGGKTYFNLTQQVDFPLPKLYDYAGIKGSLFVDYATLFGLDDKNK
KYEGKYYDSKLVRVSPGFGFSMLSPFGRLRLDFGFPLVKESYDIIPSPNVKFSIEAGI

Sequences:

>Translated_778_residues
MKKLFYILVVVFISFPALLVALGTAEKVQVKDVKCIGNERVSNQTIGFYIKLKSGDYINDDDIDSIIKDLYKTKLFASVN
AYIDDKKNLVIKIQENPLINKIILKGNKLFNSKELLNNVIQSKSLTIFTETKLQNDLMNLITTYRNNGKVGVKIEYELEK
LDSNRVNLIFKIKEGKTSKIKDIRFIGNKNFSENELEQVIKRHSNDIFSKLFRAIFKGENHYSPQYLLINTELLDRFYSS
KGYIQNNIQPIVEVDNNNQTELTFLIDEGQQYLFGNNEVNIETEIQDLSLKEEILDFITEENDKIFNRVKINNTVEKINK
YLNEKGYIFAKVNPEYAQRDNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNISEIQKSRKKLMSS
DFFETVKVNSYAVNDNAVNLDLSVKEKNTTSLYLGGGVSLPGGALIKIDLKDRNLFGTGKELSFALEKSQYVFSTDLEFV
ENNFNDSDTSLGVDVFYEKQDKPNTTFDSCDMGFFTKLSYKVTENLTNSLRYSYKYNHIHMDNKGGQDTDISEIILDRKG
EHQISSVGYTLAYNKLDNLYTPKEGYLLRLSQDISGLGGNVNFLKSEFLSFYTHPILSKIDDDITLRFKMAAGHIFSYTD
ENLNIGQHFFKGGNEIRGFDLSGIGPRAEDKNKSSLGGKTYFNLTQQVDFPLPKLYDYAGIKGSLFVDYATLFGLDDKNK
KYEGKYYDSKLVRVSPGFGFSMLSPFGRLRLDFGFPLVKESYDIIPSPNVKFSIEAGI
>Mature_778_residues
MKKLFYILVVVFISFPALLVALGTAEKVQVKDVKCIGNERVSNQTIGFYIKLKSGDYINDDDIDSIIKDLYKTKLFASVN
AYIDDKKNLVIKIQENPLINKIILKGNKLFNSKELLNNVIQSKSLTIFTETKLQNDLMNLITTYRNNGKVGVKIEYELEK
LDSNRVNLIFKIKEGKTSKIKDIRFIGNKNFSENELEQVIKRHSNDIFSKLFRAIFKGENHYSPQYLLINTELLDRFYSS
KGYIQNNIQPIVEVDNNNQTELTFLIDEGQQYLFGNNEVNIETEIQDLSLKEEILDFITEENDKIFNRVKINNTVEKINK
YLNEKGYIFAKVNPEYAQRDNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNISEIQKSRKKLMSS
DFFETVKVNSYAVNDNAVNLDLSVKEKNTTSLYLGGGVSLPGGALIKIDLKDRNLFGTGKELSFALEKSQYVFSTDLEFV
ENNFNDSDTSLGVDVFYEKQDKPNTTFDSCDMGFFTKLSYKVTENLTNSLRYSYKYNHIHMDNKGGQDTDISEIILDRKG
EHQISSVGYTLAYNKLDNLYTPKEGYLLRLSQDISGLGGNVNFLKSEFLSFYTHPILSKIDDDITLRFKMAAGHIFSYTD
ENLNIGQHFFKGGNEIRGFDLSGIGPRAEDKNKSSLGGKTYFNLTQQVDFPLPKLYDYAGIKGSLFVDYATLFGLDDKNK
KYEGKYYDSKLVRVSPGFGFSMLSPFGRLRLDFGFPLVKESYDIIPSPNVKFSIEAGI

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=459, Percent_Identity=23.7472766884532, Blast_Score=75, Evalue=3e-13,
Organism=Escherichia coli, GI1786374, Length=838, Percent_Identity=25.417661097852, Blast_Score=190, Evalue=3e-49,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 88778; Mature: 88778

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFYILVVVFISFPALLVALGTAEKVQVKDVKCIGNERVSNQTIGFYIKLKSGDYIND
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCC
DDIDSIIKDLYKTKLFASVNAYIDDKKNLVIKIQENPLINKIILKGNKLFNSKELLNNVI
CCHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHH
QSKSLTIFTETKLQNDLMNLITTYRNNGKVGVKIEYELEKLDSNRVNLIFKIKEGKTSKI
CCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCC
KDIRFIGNKNFSENELEQVIKRHSNDIFSKLFRAIFKGENHYSPQYLLINTELLDRFYSS
EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCC
KGYIQNNIQPIVEVDNNNQTELTFLIDEGQQYLFGNNEVNIETEIQDLSLKEEILDFITE
CCCEECCCEEEEEECCCCCEEEEEEEECCCEEEECCCEEEEEEEHHHCHHHHHHHHHHHC
ENDKIFNRVKINNTVEKINKYLNEKGYIFAKVNPEYAQRDNVVDVTYRVLPGKKIYINQI
CCCCEEEEEEECHHHHHHHHHHCCCCEEEEEECHHHHCCCCEEEEEEEECCCCEEEEEEE
TIDGNDRTLDKVIRSKLSVAEGDAYNISEIQKSRKKLMSSDFFETVKVNSYAVNDNAVNL
EECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEEEECCCEEEE
DLSVKEKNTTSLYLGGGVSLPGGALIKIDLKDRNLFGTGKELSFALEKSQYVFSTDLEFV
EEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCEECCCCCEEEEEECCCEEEECCHHHH
ENNFNDSDTSLGVDVFYEKQDKPNTTFDSCDMGFFTKLSYKVTENLTNSLRYSYKYNHIH
HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHEEEEEEEEEEE
MDNKGGQDTDISEIILDRKGEHQISSVGYTLAYNKLDNLYTPKEGYLLRLSQDISGLGGN
ECCCCCCCCCHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
VNFLKSEFLSFYTHPILSKIDDDITLRFKMAAGHIFSYTDENLNIGQHFFKGGNEIRGFD
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHCCCCEEECEE
LSGIGPRAEDKNKSSLGGKTYFNLTQQVDFPLPKLYDYAGIKGSLFVDYATLFGLDDKNK
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEHHHCCCCCCCC
KYEGKYYDSKLVRVSPGFGFSMLSPFGRLRLDFGFPLVKESYDIIPSPNVKFSIEAGI
CCCCEEECCEEEEECCCCCHHHHCCCCCEEEECCCCCHHCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKKLFYILVVVFISFPALLVALGTAEKVQVKDVKCIGNERVSNQTIGFYIKLKSGDYIND
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCC
DDIDSIIKDLYKTKLFASVNAYIDDKKNLVIKIQENPLINKIILKGNKLFNSKELLNNVI
CCHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHH
QSKSLTIFTETKLQNDLMNLITTYRNNGKVGVKIEYELEKLDSNRVNLIFKIKEGKTSKI
CCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCC
KDIRFIGNKNFSENELEQVIKRHSNDIFSKLFRAIFKGENHYSPQYLLINTELLDRFYSS
EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHCC
KGYIQNNIQPIVEVDNNNQTELTFLIDEGQQYLFGNNEVNIETEIQDLSLKEEILDFITE
CCCEECCCEEEEEECCCCCEEEEEEEECCCEEEECCCEEEEEEEHHHCHHHHHHHHHHHC
ENDKIFNRVKINNTVEKINKYLNEKGYIFAKVNPEYAQRDNVVDVTYRVLPGKKIYINQI
CCCCEEEEEEECHHHHHHHHHHCCCCEEEEEECHHHHCCCCEEEEEEEECCCCEEEEEEE
TIDGNDRTLDKVIRSKLSVAEGDAYNISEIQKSRKKLMSSDFFETVKVNSYAVNDNAVNL
EECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEEEEECCCEEEE
DLSVKEKNTTSLYLGGGVSLPGGALIKIDLKDRNLFGTGKELSFALEKSQYVFSTDLEFV
EEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCEECCCCCEEEEEECCCEEEECCHHHH
ENNFNDSDTSLGVDVFYEKQDKPNTTFDSCDMGFFTKLSYKVTENLTNSLRYSYKYNHIH
HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHEEEEEEEEEEE
MDNKGGQDTDISEIILDRKGEHQISSVGYTLAYNKLDNLYTPKEGYLLRLSQDISGLGGN
ECCCCCCCCCHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
VNFLKSEFLSFYTHPILSKIDDDITLRFKMAAGHIFSYTDENLNIGQHFFKGGNEIRGFD
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHCCCCEEECEE
LSGIGPRAEDKNKSSLGGKTYFNLTQQVDFPLPKLYDYAGIKGSLFVDYATLFGLDDKNK
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEHHHCCCCCCCC
KYEGKYYDSKLVRVSPGFGFSMLSPFGRLRLDFGFPLVKESYDIIPSPNVKFSIEAGI
CCCCEEECCEEEEECCCCCHHHHCCCCCEEEECCCCCHHCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]