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The map label for this gene is psd

Identifier: 225630782

GI number: 225630782

Start: 1175365

End: 1176057

Strand: Reverse

Name: psd

Synonym: WRi_010820

Alternate gene names: 225630782

Gene position: 1176057-1175365 (Counterclockwise)

Preceding gene: 225630783

Following gene: 225630781

Centisome position: 81.34

GC content: 34.78

Gene sequence:

>693_bases
ATGTGTTTTGGTTTACCTAATATAAACAGGGAAGGTTATTCATTTATAGTAGTTTCCTTTATAGTAACGTGTATAGCATT
CTCTATATCTTGGGGGTTTGGCGTTACGTGCTTGTTTCCGACATTATTGTGTACTTATTTCTTTCGTGATCCAGCAAGAG
CTGTGCCAAACAATAAGAATCTTATATTAAGTCCTGCTGATGGTGTGATTTCAAAAATTGAAGAAGTTAATTATCCTTTA
TCAGCAGAAAACGGAGAGGAGAAGAAGTTTACGCTTGTTAGCATATTTTTAAGTGTTTTGAACGTCCATGTGAACCGTAT
ACCAATATCTGGTACGATAAAGGAAATGAGTTATAAAAAAGGCAAGTTTGTATCCGCAATGAGCAATAGGTCTAGTAATG
AAAATGAAAAGCAGGTTATTGTAATTGAATACGAAAAGGGGAAAGAAATTATTGTGGAGCAAATAGCTGGATTAATTGCA
CGTCGTATCGTTTGTAATTTAGGAATATCCCAGAACGTAAAAGCAGGTGAAAGGTTTGGAATTATAAGGTTTGGCAGTAG
AGTGAATATCTATGTTCCTGCTGATACAGAAGTCAGAGTTTCAGAAGGGCAAACTGTTATTGGTGGTGAAACAATTATAG
CAAACTTAAATAAGGAAAACGTTCAAGAGAAGCTTACTTTTGATGTTATATGA

Upstream 100 bases:

>100_bases
ACCTTGTATCAAAAAGACTTTGCTGAAGCAGTTAAAAAAAGCTTTTCATGAGAAATTATAAATGATAAATTGTTAACAAT
AGGTTATTGTTAATAAGATT

Downstream 100 bases:

>100_bases
ATAACGATGAAAGTAACAGTAGATCCTTACCTATTACTAAATTATTCCCAAATTTTATAACTTTATTGGGTTTATGTTCT
GGTCTCACTTCACTTAAATT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MCFGLPNINREGYSFIVVSFIVTCIAFSISWGFGVTCLFPTLLCTYFFRDPARAVPNNKNLILSPADGVISKIEEVNYPL
SAENGEEKKFTLVSIFLSVLNVHVNRIPISGTIKEMSYKKGKFVSAMSNRSSNENEKQVIVIEYEKGKEIIVEQIAGLIA
RRIVCNLGISQNVKAGERFGIIRFGSRVNIYVPADTEVRVSEGQTVIGGETIIANLNKENVQEKLTFDVI

Sequences:

>Translated_230_residues
MCFGLPNINREGYSFIVVSFIVTCIAFSISWGFGVTCLFPTLLCTYFFRDPARAVPNNKNLILSPADGVISKIEEVNYPL
SAENGEEKKFTLVSIFLSVLNVHVNRIPISGTIKEMSYKKGKFVSAMSNRSSNENEKQVIVIEYEKGKEIIVEQIAGLIA
RRIVCNLGISQNVKAGERFGIIRFGSRVNIYVPADTEVRVSEGQTVIGGETIIANLNKENVQEKLTFDVI
>Mature_230_residues
MCFGLPNINREGYSFIVVSFIVTCIAFSISWGFGVTCLFPTLLCTYFFRDPARAVPNNKNLILSPADGVISKIEEVNYPL
SAENGEEKKFTLVSIFLSVLNVHVNRIPISGTIKEMSYKKGKFVSAMSNRSSNENEKQVIVIEYEKGKEIIVEQIAGLIA
RRIVCNLGISQNVKAGERFGIIRFGSRVNIYVPADTEVRVSEGQTVIGGETIIANLNKENVQEKLTFDVI

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_WOLPM (Q73GB0)

Other databases:

- EMBL:   AE017196
- RefSeq:   NP_966772.1
- EnsemblBacteria:   EBWOLT00000004436
- GeneID:   2738442
- GenomeReviews:   AE017196_GR
- KEGG:   wol:WD1049
- TIGR:   WD_1049
- GeneTree:   EBGT00050000031166
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   WPIP955:WD_1049-MONOMER
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 25537; Mature: 25537

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFGLPNINREGYSFIVVSFIVTCIAFSISWGFGVTCLFPTLLCTYFFRDPARAVPNNKN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCC
LILSPADGVISKIEEVNYPLSAENGEEKKFTLVSIFLSVLNVHVNRIPISGTIKEMSYKK
EEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCC
GKFVSAMSNRSSNENEKQVIVIEYEKGKEIIVEQIAGLIARRIVCNLGISQNVKAGERFG
CCHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
IIRFGSRVNIYVPADTEVRVSEGQTVIGGETIIANLNKENVQEKLTFDVI
EEEECCEEEEEECCCCEEEECCCCEEECCCEEEEECCHHHHHHHHEEECC
>Mature Secondary Structure
MCFGLPNINREGYSFIVVSFIVTCIAFSISWGFGVTCLFPTLLCTYFFRDPARAVPNNKN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCC
LILSPADGVISKIEEVNYPLSAENGEEKKFTLVSIFLSVLNVHVNRIPISGTIKEMSYKK
EEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCC
GKFVSAMSNRSSNENEKQVIVIEYEKGKEIIVEQIAGLIARRIVCNLGISQNVKAGERFG
CCHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
IIRFGSRVNIYVPADTEVRVSEGQTVIGGETIIANLNKENVQEKLTFDVI
EEEECCEEEEEECCCCEEEECCCCEEECCCEEEEECCHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA