| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is aatA [H]
Identifier: 225630692
GI number: 225630692
Start: 1057463
End: 1058656
Strand: Direct
Name: aatA [H]
Synonym: WRi_009850
Alternate gene names: 225630692
Gene position: 1057463-1058656 (Clockwise)
Preceding gene: 225630691
Following gene: 225630693
Centisome position: 73.14
GC content: 36.18
Gene sequence:
>1194_bases ATGTCAGACCTTGCAAAAAGAATGTTCCTAATAAAACCATCACCTACGATTGCTGTAACTGATAAGGCAAATAAGTTGAA AAATGAAGGAAAAAAGATCTGTGTTTTAGCTGCAGGAGAACCGGATTTTGATACTCCAGATCATATAAAAAAAGCAGCTA TTCAAGCAATAAGTGAAGGTAAGACTAAATATACTGCTGTTGATGGAACGCGTGAGCTGAAAGAAGCAATAATTAATAAG TTAAGAAAGGATAATAACCTCGAGTACACGCTTAACCAAATCTGTGTTGGTACAGGTGCTAAGCAGGTGTTATTCAATTT GTTCATGGCAACAATTAACTCTGGAGATGAAGTTATTATTCCAGCTCCTTATTGGGTTTCATATGTTGATATGGTAAGTC TTTTTGGCGGCTTGCCAGTTGTAGTAGAATGCAAACAAAATTTTAAACTGACAGCGGAATTATTGAAAAGCAGGATAACT AAAAAAACTAAATGGTTAATTCTTAACTCACCGAACAACCCTGCAGGAGCTGTGTACACATGTGATGAATTGAAAGACAT AGCACAAATATTGCTTGAATATCCACATATGAATGTCGTTACAGATGATATTTATGAGCATATAATATACGACGAAAAGT TTTTTACTATCGCTCAGGTTGAGCCGAAGCTTTATGATAGAGTTTTTGTAGTCAATGGAGTATCAAAAGCCTATGCAATG ACAGGCTGGAGAATAGGGTATATTGCAGGTAGAAGTGATGTGGTAAAAGCTATCTCTACGCTGCAGTCTCAAAGCACTTC TAATCCAAATTCGATAGCACAAGCAGCAGCAGCAGCAGCATTAAACGGTGATCATAGTTTTTTGAAAGAAAGAACAAGGA TTTTTAAGAGTCGTAGAGATTTTATGGTGAAAGAGCTAAATTCTGCCCCGGGATTATCAGCGTCTGTTCCACAAGGTGCG TTTTATTTATTTGTCTCATGTGAAGGATTGCTCAGTAAAAGCACAAAAAGTGGTAAGATAATAAATAATGATTTAGATTT TACTGAATACTTACTGGGAGATCATTTGGTTGCTGTGGTTCCAGGAATTGCATTTGGTCTAGAAAATTTTATCAGAATTT CTTATGCAACCTCTCAGGAACAATTAGAAATTGGATGTGATAGTATTACTAAAGCGTGCCAGGAGTTAAAATGA
Upstream 100 bases:
>100_bases TGCGTTGGTAAACCTGGTAAAAAGCTACTAATACAATACACAAAATTCCTAGCTTTTTTGTTGTACGGGGTTTATCATTT AAATTTAGCTTCAGTAAAAT
Downstream 100 bases:
>100_bases AATAGACTATCCATAAGTTGTATATTTTGCCATACTTCGCCAAGGTTATTTTGAATGTTCTAACTTGTGTTTTTCTATGG AAGGCATTTTTATTGATTGA
Product: Aspartate aminotransferase family enzyme
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSDLAKRMFLIKPSPTIAVTDKANKLKNEGKKICVLAAGEPDFDTPDHIKKAAIQAISEGKTKYTAVDGTRELKEAIINK LRKDNNLEYTLNQICVGTGAKQVLFNLFMATINSGDEVIIPAPYWVSYVDMVSLFGGLPVVVECKQNFKLTAELLKSRIT KKTKWLILNSPNNPAGAVYTCDELKDIAQILLEYPHMNVVTDDIYEHIIYDEKFFTIAQVEPKLYDRVFVVNGVSKAYAM TGWRIGYIAGRSDVVKAISTLQSQSTSNPNSIAQAAAAAALNGDHSFLKERTRIFKSRRDFMVKELNSAPGLSASVPQGA FYLFVSCEGLLSKSTKSGKIINNDLDFTEYLLGDHLVAVVPGIAFGLENFIRISYATSQEQLEIGCDSITKACQELK
Sequences:
>Translated_397_residues MSDLAKRMFLIKPSPTIAVTDKANKLKNEGKKICVLAAGEPDFDTPDHIKKAAIQAISEGKTKYTAVDGTRELKEAIINK LRKDNNLEYTLNQICVGTGAKQVLFNLFMATINSGDEVIIPAPYWVSYVDMVSLFGGLPVVVECKQNFKLTAELLKSRIT KKTKWLILNSPNNPAGAVYTCDELKDIAQILLEYPHMNVVTDDIYEHIIYDEKFFTIAQVEPKLYDRVFVVNGVSKAYAM TGWRIGYIAGRSDVVKAISTLQSQSTSNPNSIAQAAAAAALNGDHSFLKERTRIFKSRRDFMVKELNSAPGLSASVPQGA FYLFVSCEGLLSKSTKSGKIINNDLDFTEYLLGDHLVAVVPGIAFGLENFIRISYATSQEQLEIGCDSITKACQELK >Mature_396_residues SDLAKRMFLIKPSPTIAVTDKANKLKNEGKKICVLAAGEPDFDTPDHIKKAAIQAISEGKTKYTAVDGTRELKEAIINKL RKDNNLEYTLNQICVGTGAKQVLFNLFMATINSGDEVIIPAPYWVSYVDMVSLFGGLPVVVECKQNFKLTAELLKSRITK KTKWLILNSPNNPAGAVYTCDELKDIAQILLEYPHMNVVTDDIYEHIIYDEKFFTIAQVEPKLYDRVFVVNGVSKAYAMT GWRIGYIAGRSDVVKAISTLQSQSTSNPNSIAQAAAAAALNGDHSFLKERTRIFKSRRDFMVKELNSAPGLSASVPQGAF YLFVSCEGLLSKSTKSGKIINNDLDFTEYLLGDHLVAVVPGIAFGLENFIRISYATSQEQLEIGCDSITKACQELK
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=404, Percent_Identity=25.4950495049505, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI169881279, Length=404, Percent_Identity=25.4950495049505, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI56713256, Length=394, Percent_Identity=28.1725888324873, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI56713254, Length=394, Percent_Identity=28.1725888324873, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI169881281, Length=318, Percent_Identity=24.2138364779874, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4507369, Length=415, Percent_Identity=24.578313253012, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1786816, Length=353, Percent_Identity=25.4957507082153, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1788627, Length=321, Percent_Identity=29.2834890965732, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788722, Length=376, Percent_Identity=27.1276595744681, Blast_Score=119, Evalue=5e-28, Organism=Caenorhabditis elegans, GI71994472, Length=327, Percent_Identity=23.8532110091743, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71994476, Length=327, Percent_Identity=23.8532110091743, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17567369, Length=365, Percent_Identity=25.4794520547945, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17567663, Length=401, Percent_Identity=22.9426433915212, Blast_Score=110, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322401, Length=385, Percent_Identity=24.6753246753247, Blast_Score=117, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6320317, Length=341, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573069, Length=328, Percent_Identity=26.5243902439024, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24646114, Length=328, Percent_Identity=26.5243902439024, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI28573067, Length=328, Percent_Identity=26.5243902439024, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI28573065, Length=328, Percent_Identity=26.5243902439024, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI18859735, Length=386, Percent_Identity=22.7979274611399, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43831; Mature: 43700
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLAKRMFLIKPSPTIAVTDKANKLKNEGKKICVLAAGEPDFDTPDHIKKAAIQAISEG CCCHHCCEEEECCCCCEEECCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC KTKYTAVDGTRELKEAIINKLRKDNNLEYTLNQICVGTGAKQVLFNLFMATINSGDEVII CCEEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEE PAPYWVSYVDMVSLFGGLPVVVECKQNFKLTAELLKSRITKKTKWLILNSPNNPAGAVYT CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEE CDELKDIAQILLEYPHMNVVTDDIYEHIIYDEKFFTIAQVEPKLYDRVFVVNGVSKAYAM HHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCEEEEEECCHHHHCEEEEEECCHHHHHH TGWRIGYIAGRSDVVKAISTLQSQSTSNPNSIAQAAAAAALNGDHSFLKERTRIFKSRRD CCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FMVKELNSAPGLSASVPQGAFYLFVSCEGLLSKSTKSGKIINNDLDFTEYLLGDHLVAVV HHHHHHCCCCCCCCCCCCCEEEEEEEECHHHCCCCCCCCEECCCCCHHHHHHHCHHHHHH PGIAFGLENFIRISYATSQEQLEIGCDSITKACQELK HHHHHHHHHHEEEEECCCHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SDLAKRMFLIKPSPTIAVTDKANKLKNEGKKICVLAAGEPDFDTPDHIKKAAIQAISEG CCHHCCEEEECCCCCEEECCCHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCC KTKYTAVDGTRELKEAIINKLRKDNNLEYTLNQICVGTGAKQVLFNLFMATINSGDEVII CCEEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEE PAPYWVSYVDMVSLFGGLPVVVECKQNFKLTAELLKSRITKKTKWLILNSPNNPAGAVYT CCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEE CDELKDIAQILLEYPHMNVVTDDIYEHIIYDEKFFTIAQVEPKLYDRVFVVNGVSKAYAM HHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCEEEEEECCHHHHCEEEEEECCHHHHHH TGWRIGYIAGRSDVVKAISTLQSQSTSNPNSIAQAAAAAALNGDHSFLKERTRIFKSRRD CCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FMVKELNSAPGLSASVPQGAFYLFVSCEGLLSKSTKSGKIINNDLDFTEYLLGDHLVAVV HHHHHHCCCCCCCCCCCCCEEEEEEEECHHHCCCCCCCCEECCCCCHHHHHHHCHHHHHH PGIAFGLENFIRISYATSQEQLEIGCDSITKACQELK HHHHHHHHHHEEEEECCCHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA