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The map label for this gene is 225630622

Identifier: 225630622

GI number: 225630622

Start: 968156

End: 968650

Strand: Direct

Name: 225630622

Synonym: WRi_008930

Alternate gene names: NA

Gene position: 968156-968650 (Clockwise)

Preceding gene: 225630618

Following gene: 225630624

Centisome position: 66.96

GC content: 31.92

Gene sequence:

>495_bases
ATGTCGGACGATGAGTTGGATTGGCAAAAAAATGTTAAGCCAATAAAATGTGGAAAAGTTACTTTGAAAGTTGATCATAA
AGTAAATATAAAGTCTATGGTTGATAAAGGTACCTCCGACTTACAAGGGAATTTTCTTAATACCAATAATGGTAACTCAT
CATTTTGTCTTGACCAAAACACAAAATCAAAAGTTGATAGGGGTAAATATTTTATAAGCGACAAGCTCGATTTGCATGGC
TATAATATAGAGGATGCTTACTGTAAATTGATAGATTTTATTATCAAAAATTATCGAGCAGGGAATAGATGTTTATTGGT
AATTACGGGATACGGCAGTGCAACAAATAAAACAGACACTATAAAGAATAACTTAAATAAGTGGTTAAATGATACTAAAA
TCCAGCATATGGTTCTATACTACCAGCAAGCTACGAAAAAACATGGTGGTAAAGGAGCTTTTTATGTTTTATTAAGAAGG
CTTAGGTCCTATTAG

Upstream 100 bases:

>100_bases
GATTTCATCGTATTATCGAAAATCTGGTTTTTATAGAATAAGCAACATTTTACTATGTTTGAATATTGTTGTAAAATTAT
ACAATTCGATTAATGCGTTT

Downstream 100 bases:

>100_bases
CTGCTTAAGTTTCCTTTTAAGCCTTAATTTTTCTTGTATAACCATACAGTGTTCGGCAGCGCGTGACGCACAACTGTGCG
AACATTGTGATTTGGGTCTA

Product: Smr domain family protein

Products: NA

Alternate protein names: Smr Domain Protein; DNA Repair Protein Smr/MutS Family; Smr/MutS Family Protein; Smr/MutS Family DNA Repair Protein; Smr Family Protein; DNA Repair Protein; Smr Protein/Muts2-Like; Smr Protein/MutS2 Domain Protein; Smr Protein/MutS2 C-Terminal; Smr Protein; Smr Domain Family Protein; Smr Protein/MutS2-Like

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSDDELDWQKNVKPIKCGKVTLKVDHKVNIKSMVDKGTSDLQGNFLNTNNGNSSFCLDQNTKSKVDRGKYFISDKLDLHG
YNIEDAYCKLIDFIIKNYRAGNRCLLVITGYGSATNKTDTIKNNLNKWLNDTKIQHMVLYYQQATKKHGGKGAFYVLLRR
LRSY

Sequences:

>Translated_164_residues
MSDDELDWQKNVKPIKCGKVTLKVDHKVNIKSMVDKGTSDLQGNFLNTNNGNSSFCLDQNTKSKVDRGKYFISDKLDLHG
YNIEDAYCKLIDFIIKNYRAGNRCLLVITGYGSATNKTDTIKNNLNKWLNDTKIQHMVLYYQQATKKHGGKGAFYVLLRR
LRSY
>Mature_163_residues
SDDELDWQKNVKPIKCGKVTLKVDHKVNIKSMVDKGTSDLQGNFLNTNNGNSSFCLDQNTKSKVDRGKYFISDKLDLHGY
NIEDAYCKLIDFIIKNYRAGNRCLLVITGYGSATNKTDTIKNNLNKWLNDTKIQHMVLYYQQATKKHGGKGAFYVLLRRL
RSY

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18809; Mature: 18678

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDELDWQKNVKPIKCGKVTLKVDHKVNIKSMVDKGTSDLQGNFLNTNNGNSSFCLDQN
CCCCCCCHHHCCCEEECCEEEEEECCCCCHHHHHCCCCCCCCCCEEECCCCCCEEEECCC
TKSKVDRGKYFISDKLDLHGYNIEDAYCKLIDFIIKNYRAGNRCLLVITGYGSATNKTDT
CHHHHHCCEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH
IKNNLNKWLNDTKIQHMVLYYQQATKKHGGKGAFYVLLRRLRSY
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SDDELDWQKNVKPIKCGKVTLKVDHKVNIKSMVDKGTSDLQGNFLNTNNGNSSFCLDQN
CCCCCCHHHCCCEEECCEEEEEECCCCCHHHHHCCCCCCCCCCEEECCCCCCEEEECCC
TKSKVDRGKYFISDKLDLHGYNIEDAYCKLIDFIIKNYRAGNRCLLVITGYGSATNKTDT
CHHHHHCCEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH
IKNNLNKWLNDTKIQHMVLYYQQATKKHGGKGAFYVLLRRLRSY
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA