| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is pgm [H]
Identifier: 225630571
GI number: 225630571
Start: 904627
End: 906147
Strand: Direct
Name: pgm [H]
Synonym: WRi_008330
Alternate gene names: 225630571
Gene position: 904627-906147 (Clockwise)
Preceding gene: 225630570
Following gene: 225630573
Centisome position: 62.57
GC content: 37.34
Gene sequence:
>1521_bases ATGGGCATTAAATCAGTCGTTTTATGTATACTAGATGGTTGGGGAAATGGAGTAGAAAACAGTAAATACAATGCTATTAG CAACGCAAATCCACCCTGTTGGCAATATATTAGCTCTAATTATCCAAAATGCAGTTTATCCGCCTGTGGAACTGATGTGG GGTTACCTGGTGGTCAAATAGGTAACTCAGAAGTTGGCCATATGAATATTGGCAGTGGTAGAGTGGTAATACAAAGCCTT CAGCGCATTAATCAAGAGATTGGAACAATAGAAAACAATGTAAATCTACAAAGTTTTATTAGTAATCTAAAAAGTAAGAA CGGAGTATGCCATATAATGGGATTAGTGTCAGATGGCGGTGTTCATTCGCATCAAAAGCATATTTCAACTTTAGCAAATA AAATATCACAGCATGGAATCAAAGTGGTGATACATGCATTTTTAGATGGCAGAGACACATTGCCAAATTCAGGAAAAAAA TGCATTCAAGAATTTATAAAGAGTATAAAGGGAAATGACATAAGAATTGCTACTGTTTCTGGGCGTTACTATGCTATGGA CCGTGATAACAGGTGGGAGAGAACAATTGAAGCTTATGAGGCTATCGCATTTGCAAAGGCACCTCGTCATGATAATGCAG TATCGTTGATTGATGAAAATTATCAAAATAACATAACTGATGAGTTTATCAGGCCCGCAGTAATAGGTGACTATCAAGGT ATAAAACCAGAAGATGGAGTGCTGTTGGCTAACTTTCGTGCTGATCGAATGATACAATTAGCAAGTATTTTGCTTGGCAA AACAGATTACGCTAAGGTAGCAAAATTCTCTTCAATTCTAAGCATGATGAAATATAAAAAAGATCTTCAGATCCCTTATA TTTTTCCTCCTACTTCTTTCGCTGATACTCTAGGACAAACAATAGAAGACAATAAATTGCAACAATTACGTATCGCCGAA ACCGAGAAATACGCTCATGTGACTTTCTTTTTCAATTGTGGAAAAGAAGAACCTTTCTCTGGTGAAGAAAGAATACTCAT TCCCTCACCAAAAGTTCAAACTTACGATTTGCAGCCCGAAATGTCAGCCTTCGAGCTCACAGAAAAGCTTGTAGAAAAAA TTCACTCCCAAGAATTCGCACTGATAGTTGTAAATTACGCTAATCCTGATATGGTAGGACATACAGGTAATATAAAAGCA GCCGAGAAAGCTGTGCTAGCTGTAGATGATTGTCTTGCAAAAGTGCTGAGTGCTGTTAAAAAGTCAAGCAACACCGCATT AATTGTTACTGCAGACCATGGTAATGTGGAATGTATGTTCGATGAAGAAAATAATACACCTCATACAGCACACACTCTAA ATAAAGTGCCATTTATTGTGTCTTGCGATAATCTAAAACTAAGAGACGGAAGGTTATCTGACATCGCCCCTACTATTTTA CAGCTACTTGGAATTAAGAAACCTGATGAAATGACAGGTAGTTCATTGATTTCTTGCATTACCCTCTGTCATTCCAGCTA G
Upstream 100 bases:
>100_bases GGTAGCTCAGTGGTAGAGCAGTTGGCTGTTAACCAATTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCTCTTCTCTGTTG AATTTTAGTGTTGATTTTAT
Downstream 100 bases:
>100_bases GCAGCGTTATGCACCGGAATGACATCAAATAGATGTGTTTTAACTTAATCCAACTTTTAAATTTTTCGCTGTTAGTACTA ATGATTCATTAAAGAAGCTG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MGIKSVVLCILDGWGNGVENSKYNAISNANPPCWQYISSNYPKCSLSACGTDVGLPGGQIGNSEVGHMNIGSGRVVIQSL QRINQEIGTIENNVNLQSFISNLKSKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHGIKVVIHAFLDGRDTLPNSGKK CIQEFIKSIKGNDIRIATVSGRYYAMDRDNRWERTIEAYEAIAFAKAPRHDNAVSLIDENYQNNITDEFIRPAVIGDYQG IKPEDGVLLANFRADRMIQLASILLGKTDYAKVAKFSSILSMMKYKKDLQIPYIFPPTSFADTLGQTIEDNKLQQLRIAE TEKYAHVTFFFNCGKEEPFSGEERILIPSPKVQTYDLQPEMSAFELTEKLVEKIHSQEFALIVVNYANPDMVGHTGNIKA AEKAVLAVDDCLAKVLSAVKKSSNTALIVTADHGNVECMFDEENNTPHTAHTLNKVPFIVSCDNLKLRDGRLSDIAPTIL QLLGIKKPDEMTGSSLISCITLCHSS
Sequences:
>Translated_506_residues MGIKSVVLCILDGWGNGVENSKYNAISNANPPCWQYISSNYPKCSLSACGTDVGLPGGQIGNSEVGHMNIGSGRVVIQSL QRINQEIGTIENNVNLQSFISNLKSKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHGIKVVIHAFLDGRDTLPNSGKK CIQEFIKSIKGNDIRIATVSGRYYAMDRDNRWERTIEAYEAIAFAKAPRHDNAVSLIDENYQNNITDEFIRPAVIGDYQG IKPEDGVLLANFRADRMIQLASILLGKTDYAKVAKFSSILSMMKYKKDLQIPYIFPPTSFADTLGQTIEDNKLQQLRIAE TEKYAHVTFFFNCGKEEPFSGEERILIPSPKVQTYDLQPEMSAFELTEKLVEKIHSQEFALIVVNYANPDMVGHTGNIKA AEKAVLAVDDCLAKVLSAVKKSSNTALIVTADHGNVECMFDEENNTPHTAHTLNKVPFIVSCDNLKLRDGRLSDIAPTIL QLLGIKKPDEMTGSSLISCITLCHSS >Mature_505_residues GIKSVVLCILDGWGNGVENSKYNAISNANPPCWQYISSNYPKCSLSACGTDVGLPGGQIGNSEVGHMNIGSGRVVIQSLQ RINQEIGTIENNVNLQSFISNLKSKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHGIKVVIHAFLDGRDTLPNSGKKC IQEFIKSIKGNDIRIATVSGRYYAMDRDNRWERTIEAYEAIAFAKAPRHDNAVSLIDENYQNNITDEFIRPAVIGDYQGI KPEDGVLLANFRADRMIQLASILLGKTDYAKVAKFSSILSMMKYKKDLQIPYIFPPTSFADTLGQTIEDNKLQQLRIAET EKYAHVTFFFNCGKEEPFSGEERILIPSPKVQTYDLQPEMSAFELTEKLVEKIHSQEFALIVVNYANPDMVGHTGNIKAA EKAVLAVDDCLAKVLSAVKKSSNTALIVTADHGNVECMFDEENNTPHTAHTLNKVPFIVSCDNLKLRDGRLSDIAPTILQ LLGIKKPDEMTGSSLISCITLCHSS
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=509, Percent_Identity=44.4007858546169, Blast_Score=402, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17507741, Length=516, Percent_Identity=42.2480620155039, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI32564249, Length=516, Percent_Identity=42.2480620155039, Blast_Score=374, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 55720; Mature: 55589
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKSVVLCILDGWGNGVENSKYNAISNANPPCWQYISSNYPKCSLSACGTDVGLPGGQI CCHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHCCCCCCCCCCCC GNSEVGHMNIGSGRVVIQSLQRINQEIGTIENNVNLQSFISNLKSKNGVCHIMGLVSDGG CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCC VHSHQKHISTLANKISQHGIKVVIHAFLDGRDTLPNSGKKCIQEFIKSIKGNDIRIATVS CCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEC GRYYAMDRDNRWERTIEAYEAIAFAKAPRHDNAVSLIDENYQNNITDEFIRPAVIGDYQG CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCHHCCCCCC IKPEDGVLLANFRADRMIQLASILLGKTDYAKVAKFSSILSMMKYKKDLQIPYIFPPTSF CCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH ADTLGQTIEDNKLQQLRIAETEKYAHVTFFFNCGKEEPFSGEERILIPSPKVQTYDLQPE HHHHHCCCCCCCHHHEEEECCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCC MSAFELTEKLVEKIHSQEFALIVVNYANPDMVGHTGNIKAAEKAVLAVDDCLAKVLSAVK HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSSNTALIVTADHGNVECMFDEENNTPHTAHTLNKVPFIVSCDNLKLRDGRLSDIAPTIL CCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCEEECCCCCHHHHHHHH QLLGIKKPDEMTGSSLISCITLCHSS HHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIKSVVLCILDGWGNGVENSKYNAISNANPPCWQYISSNYPKCSLSACGTDVGLPGGQI CHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEHHHCCCCCCCCCCCC GNSEVGHMNIGSGRVVIQSLQRINQEIGTIENNVNLQSFISNLKSKNGVCHIMGLVSDGG CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCC VHSHQKHISTLANKISQHGIKVVIHAFLDGRDTLPNSGKKCIQEFIKSIKGNDIRIATVS CCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEC GRYYAMDRDNRWERTIEAYEAIAFAKAPRHDNAVSLIDENYQNNITDEFIRPAVIGDYQG CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCHHCCCCCC IKPEDGVLLANFRADRMIQLASILLGKTDYAKVAKFSSILSMMKYKKDLQIPYIFPPTSF CCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHH ADTLGQTIEDNKLQQLRIAETEKYAHVTFFFNCGKEEPFSGEERILIPSPKVQTYDLQPE HHHHHCCCCCCCHHHEEEECCCCEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCC MSAFELTEKLVEKIHSQEFALIVVNYANPDMVGHTGNIKAAEKAVLAVDDCLAKVLSAVK HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSSNTALIVTADHGNVECMFDEENNTPHTAHTLNKVPFIVSCDNLKLRDGRLSDIAPTIL CCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCEEECCCCCHHHHHHHH QLLGIKKPDEMTGSSLISCITLCHSS HHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA