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The map label for this gene is comM [H]

Identifier: 225630503

GI number: 225630503

Start: 815780

End: 817243

Strand: Reverse

Name: comM [H]

Synonym: WRi_007540

Alternate gene names: 225630503

Gene position: 817243-815780 (Counterclockwise)

Preceding gene: 225630504

Following gene: 225630502

Centisome position: 56.52

GC content: 38.59

Gene sequence:

>1464_bases
TTGATCAAAATAGGCATAATAGAATTATGCAATGTTGTACTAGCAGTCAATATTGTTGGATTGCCAGATAAAACTGTTGC
GGAATCCAAAGAACGCATCAGAGCAGCGTTAAATTCAATCAATCTACTACTACCTCCAAAAAGAATTACAGTTAATCTCT
CCCCTGCGGATTTGCTGAAAGAAGGCAGTCATTATGACTTGGCTATTGCTATTGGACTACTTGTTGTAATGAATGTGATA
CCAGTTGAAAAAGTTCAGTCTTATATAATCATGGGTGAACTGGCTCTTGATAGCAGAGTTATTCCAGTTTCAGGTGTGCT
GCCAACAGCAATTAATGCAAAAAAGGACAATAAAGGAGTAATTTGCCCGAGAGGAAATGGTGTAGAAGCTGTATGGGTGA
AGAATGTTTCAATTCTGGCTATAGAGAAATTAACTGATATTATCAGACACTTTAAGGGTGAGCAATTAATTCAGCCAGTA
ATTTTTAATTATAGTGATGCACCCAAAGAAAAAAGATTGGTTCCCGATATGAAGGATATCAAAGGCCAAGTTGTTGCAAA
AAGAGCAGCTGAAATTGCAGCAGCAGGTGGGCATAATATGCTTCTTGTTGGCCCTCCTGGTACTGGAAAATCAATGCTTG
CTAAGCGCTTTATAGGATTGCTGCCTGATTTAACCGAACAGGAGATGATTGATGTTAATATTATTTCCAGCATAACAAAA
ACTGGTAATGAAATATTCAAAGTAACTCGTCCCTTTCGTGAACCTCATCATTCATGCTCTATGCCAGCGATGATAGGGGG
AGGAAAGAATGCAAAACCTGGAGAAATTACCATGGCTCACAATGGCGTGTTATTCCTTGATGAGTTGCCAGAATTTCCAA
GACTTGTGCTTGATTCTCTGCGCCAACCACTTGAAGATAGAAAAGTTACCGTTGCAAGGGCAAATGCTCACATAACCTAC
CCTGCAAATTTTCAACTGATTGCTGCAATGAACCCTTGCAGGTGCGGTTATTTAGGTGATGCAAGCAGATCGTGCAACAA
AGCTCCAAAGTGTGGCACAGATTACAAAAACAAAATATCAGGCCCATTGCTTGATAGAATAGACATATGCATTGAAATGC
CAAACGTTAGCATACTCTCTCCTGAAATCTCTGTGGAGGGAGAAAGTACTAAAATCATAAGAGAAAGAGTGATAGCAGCA
AGAAAAGTTCAAACTGAGCGCTATAGTGAATTAAATATTCGTTGCAATTCAGAAGTAAGCGGTGAAGCATTTAATAAATT
TACTGAACCAGATCAGGCAGGGTTAGAATTGCTAAAATACGTACTGAAAGAAAATTACATTTCCAATCGAGGCTACACAC
GCGTATTAAAAGTTGCAAGAACTATTGCAGATCTTGCAAAAAGTGAAGAAGTAAAAAGAGCACACATTGCTGAAGCGCTC
AATTACAGAATAAAGGTATATTAA

Upstream 100 bases:

>100_bases
TGGCAGACTAAGCAAAATATTATTAGAATGTTAATTCATCAAATTGAAATCAACCACAACCACTTATACATAGTATTTCG
CATAAAAAGTCTTGCAAATT

Downstream 100 bases:

>100_bases
AAAATTAGTTTACTTGACAGGCAATTTTTTTTACTATATGCTTCCTTAATGAAATTTTAACATTCTATTTAAGGAGTAGA
GTTATGGCATTAACAAATTA

Product: Mg chelatase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MIKIGIIELCNVVLAVNIVGLPDKTVAESKERIRAALNSINLLLPPKRITVNLSPADLLKEGSHYDLAIAIGLLVVMNVI
PVEKVQSYIIMGELALDSRVIPVSGVLPTAINAKKDNKGVICPRGNGVEAVWVKNVSILAIEKLTDIIRHFKGEQLIQPV
IFNYSDAPKEKRLVPDMKDIKGQVVAKRAAEIAAAGGHNMLLVGPPGTGKSMLAKRFIGLLPDLTEQEMIDVNIISSITK
TGNEIFKVTRPFREPHHSCSMPAMIGGGKNAKPGEITMAHNGVLFLDELPEFPRLVLDSLRQPLEDRKVTVARANAHITY
PANFQLIAAMNPCRCGYLGDASRSCNKAPKCGTDYKNKISGPLLDRIDICIEMPNVSILSPEISVEGESTKIIRERVIAA
RKVQTERYSELNIRCNSEVSGEAFNKFTEPDQAGLELLKYVLKENYISNRGYTRVLKVARTIADLAKSEEVKRAHIAEAL
NYRIKVY

Sequences:

>Translated_487_residues
MIKIGIIELCNVVLAVNIVGLPDKTVAESKERIRAALNSINLLLPPKRITVNLSPADLLKEGSHYDLAIAIGLLVVMNVI
PVEKVQSYIIMGELALDSRVIPVSGVLPTAINAKKDNKGVICPRGNGVEAVWVKNVSILAIEKLTDIIRHFKGEQLIQPV
IFNYSDAPKEKRLVPDMKDIKGQVVAKRAAEIAAAGGHNMLLVGPPGTGKSMLAKRFIGLLPDLTEQEMIDVNIISSITK
TGNEIFKVTRPFREPHHSCSMPAMIGGGKNAKPGEITMAHNGVLFLDELPEFPRLVLDSLRQPLEDRKVTVARANAHITY
PANFQLIAAMNPCRCGYLGDASRSCNKAPKCGTDYKNKISGPLLDRIDICIEMPNVSILSPEISVEGESTKIIRERVIAA
RKVQTERYSELNIRCNSEVSGEAFNKFTEPDQAGLELLKYVLKENYISNRGYTRVLKVARTIADLAKSEEVKRAHIAEAL
NYRIKVY
>Mature_487_residues
MIKIGIIELCNVVLAVNIVGLPDKTVAESKERIRAALNSINLLLPPKRITVNLSPADLLKEGSHYDLAIAIGLLVVMNVI
PVEKVQSYIIMGELALDSRVIPVSGVLPTAINAKKDNKGVICPRGNGVEAVWVKNVSILAIEKLTDIIRHFKGEQLIQPV
IFNYSDAPKEKRLVPDMKDIKGQVVAKRAAEIAAAGGHNMLLVGPPGTGKSMLAKRFIGLLPDLTEQEMIDVNIISSITK
TGNEIFKVTRPFREPHHSCSMPAMIGGGKNAKPGEITMAHNGVLFLDELPEFPRLVLDSLRQPLEDRKVTVARANAHITY
PANFQLIAAMNPCRCGYLGDASRSCNKAPKCGTDYKNKISGPLLDRIDICIEMPNVSILSPEISVEGESTKIIRERVIAA
RKVQTERYSELNIRCNSEVSGEAFNKFTEPDQAGLELLKYVLKENYISNRGYTRVLKVARTIADLAKSEEVKRAHIAEAL
NYRIKVY

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=473, Percent_Identity=42.0718816067653, Blast_Score=345, Evalue=3e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 53565; Mature: 53565

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIGIIELCNVVLAVNIVGLPDKTVAESKERIRAALNSINLLLPPKRITVNLSPADLLK
CEEECHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEECCHHHHHH
EGSHYDLAIAIGLLVVMNVIPVEKVQSYIIMGELALDSRVIPVSGVLPTAINAKKDNKGV
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCEEEECCCCCCCCCCCCCCCCCE
ICPRGNGVEAVWVKNVSILAIEKLTDIIRHFKGEQLIQPVIFNYSDAPKEKRLVPDMKDI
EECCCCCEEEEEECCEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCCCCHHHH
KGQVVAKRAAEIAAAGGHNMLLVGPPGTGKSMLAKRFIGLLPDLTEQEMIDVNIISSITK
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TGNEIFKVTRPFREPHHSCSMPAMIGGGKNAKPGEITMAHNGVLFLDELPEFPRLVLDSL
CCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHH
RQPLEDRKVTVARANAHITYPANFQLIAAMNPCRCGYLGDASRSCNKAPKCGTDYKNKIS
HCCHHHCCEEEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
GPLLDRIDICIEMPNVSILSPEISVEGESTKIIRERVIAARKVQTERYSELNIRCNSEVS
CCHHHHHHHEEECCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
GEAFNKFTEPDQAGLELLKYVLKENYISNRGYTRVLKVARTIADLAKSEEVKRAHIAEAL
CHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYRIKVY
CCEEEEC
>Mature Secondary Structure
MIKIGIIELCNVVLAVNIVGLPDKTVAESKERIRAALNSINLLLPPKRITVNLSPADLLK
CEEECHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEECCHHHHHH
EGSHYDLAIAIGLLVVMNVIPVEKVQSYIIMGELALDSRVIPVSGVLPTAINAKKDNKGV
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCEEEECCCCCCCCCCCCCCCCCE
ICPRGNGVEAVWVKNVSILAIEKLTDIIRHFKGEQLIQPVIFNYSDAPKEKRLVPDMKDI
EECCCCCEEEEEECCEEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCCCCHHHH
KGQVVAKRAAEIAAAGGHNMLLVGPPGTGKSMLAKRFIGLLPDLTEQEMIDVNIISSITK
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TGNEIFKVTRPFREPHHSCSMPAMIGGGKNAKPGEITMAHNGVLFLDELPEFPRLVLDSL
CCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEECCCCCHHHHHHHHH
RQPLEDRKVTVARANAHITYPANFQLIAAMNPCRCGYLGDASRSCNKAPKCGTDYKNKIS
HCCHHHCCEEEEECCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC
GPLLDRIDICIEMPNVSILSPEISVEGESTKIIRERVIAARKVQTERYSELNIRCNSEVS
CCHHHHHHHEEECCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
GEAFNKFTEPDQAGLELLKYVLKENYISNRGYTRVLKVARTIADLAKSEEVKRAHIAEAL
CHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYRIKVY
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]