Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630467

Identifier: 225630467

GI number: 225630467

Start: 772340

End: 772837

Strand: Reverse

Name: 225630467

Synonym: WRi_007130

Alternate gene names: NA

Gene position: 772837-772340 (Counterclockwise)

Preceding gene: 225630468

Following gene: 225630466

Centisome position: 53.45

GC content: 32.53

Gene sequence:

>498_bases
ATGTTTAACATTGAGGTTAATGAAAATATTGAGAGAATTATTCACAACATTGATGCTAACAAAGCAAAAATAGAATTGGC
AGCGGTAAGAGCGCTAAACAAAACGGCATTATGGTTAAAATCTCAGGCTGTCCGAGAAATCAGTGAAGAAAAGCAAATTA
GGCTAAAAGTAATTAGAAAAAGACTAAGAATTATCAAGGCAAGGAAAAGCACTTTGAAGGTTTTAATTAGAGCATATCTG
TATGATGTGAGAATGAGAAATATAAAACAAGCAAAAATAAGAACAGCATTTAATGATGCATTTATGGCAACGATGCCAAG
AGGCTATCGTGGTATTTTTAAACGTGAAGGAAAAACAGCACTGCCAATACAGGAAGTTAAACTACCACTTGAACCTGAGG
CTTCAAGGATAATAGAAAATCTTGTTAATTATGAAGTTGAAAGGATATTTGAAAAATATTTTACACATGAGTTATTTTAT
GACGGCATTTTGGACTAA

Upstream 100 bases:

>100_bases
TTTGTTATTGACGATCGTAAATATAAAGTATATTCGCCACCGCTTCGAGATAACTCAGGAGTAGTGTGGAATATAAAATG
CACGGTATTTGGAGAGAAGG

Downstream 100 bases:

>100_bases
TTTACATGAGGTAATCTGTAATACGCTAAAGGCAGAGATACCAGCAATTCAAACTTGTGAGGTTTATCCAGCAATAAGGA
AAGAGTTAGCAGCTCCAGCG

Product: minor tail protein Z, putative

Products: NA

Alternate protein names: Prophage LambdaW1 Minor Tail Protein Z; Puative Minor Tail Protein Z

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRKRLRIIKARKSTLKVLIRAYL
YDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTALPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFY
DGILD

Sequences:

>Translated_165_residues
MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRKRLRIIKARKSTLKVLIRAYL
YDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTALPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFY
DGILD
>Mature_165_residues
MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRKRLRIIKARKSTLKVLIRAYL
YDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTALPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFY
DGILD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19504; Mature: 19504

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRK
CEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRIIKARKSTLKVLIRAYLYDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
LPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFYDGILD
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRK
CEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRIIKARKSTLKVLIRAYLYDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
LPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFYDGILD
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA