| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630467
Identifier: 225630467
GI number: 225630467
Start: 772340
End: 772837
Strand: Reverse
Name: 225630467
Synonym: WRi_007130
Alternate gene names: NA
Gene position: 772837-772340 (Counterclockwise)
Preceding gene: 225630468
Following gene: 225630466
Centisome position: 53.45
GC content: 32.53
Gene sequence:
>498_bases ATGTTTAACATTGAGGTTAATGAAAATATTGAGAGAATTATTCACAACATTGATGCTAACAAAGCAAAAATAGAATTGGC AGCGGTAAGAGCGCTAAACAAAACGGCATTATGGTTAAAATCTCAGGCTGTCCGAGAAATCAGTGAAGAAAAGCAAATTA GGCTAAAAGTAATTAGAAAAAGACTAAGAATTATCAAGGCAAGGAAAAGCACTTTGAAGGTTTTAATTAGAGCATATCTG TATGATGTGAGAATGAGAAATATAAAACAAGCAAAAATAAGAACAGCATTTAATGATGCATTTATGGCAACGATGCCAAG AGGCTATCGTGGTATTTTTAAACGTGAAGGAAAAACAGCACTGCCAATACAGGAAGTTAAACTACCACTTGAACCTGAGG CTTCAAGGATAATAGAAAATCTTGTTAATTATGAAGTTGAAAGGATATTTGAAAAATATTTTACACATGAGTTATTTTAT GACGGCATTTTGGACTAA
Upstream 100 bases:
>100_bases TTTGTTATTGACGATCGTAAATATAAAGTATATTCGCCACCGCTTCGAGATAACTCAGGAGTAGTGTGGAATATAAAATG CACGGTATTTGGAGAGAAGG
Downstream 100 bases:
>100_bases TTTACATGAGGTAATCTGTAATACGCTAAAGGCAGAGATACCAGCAATTCAAACTTGTGAGGTTTATCCAGCAATAAGGA AAGAGTTAGCAGCTCCAGCG
Product: minor tail protein Z, putative
Products: NA
Alternate protein names: Prophage LambdaW1 Minor Tail Protein Z; Puative Minor Tail Protein Z
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRKRLRIIKARKSTLKVLIRAYL YDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTALPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFY DGILD
Sequences:
>Translated_165_residues MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRKRLRIIKARKSTLKVLIRAYL YDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTALPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFY DGILD >Mature_165_residues MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRKRLRIIKARKSTLKVLIRAYL YDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTALPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFY DGILD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19504; Mature: 19504
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRK CEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRIIKARKSTLKVLIRAYLYDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC LPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFYDGILD CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFNIEVNENIERIIHNIDANKAKIELAAVRALNKTALWLKSQAVREISEEKQIRLKVIRK CEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRIIKARKSTLKVLIRAYLYDVRMRNIKQAKIRTAFNDAFMATMPRGYRGIFKREGKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC LPIQEVKLPLEPEASRIIENLVNYEVERIFEKYFTHELFYDGILD CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA