BacMap

Definition	Wolbachia sp. wRi, complete genome.
Accession	NC_012416
Length	1,445,873

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The map label for this gene is yahD [C]

Identifier: 225630446

GI number: 225630446

Start: 755496

End: 756032

Strand: Direct

Name: yahD [C]

Synonym: WRi_006900

Alternate gene names: 225630446

Gene position: 755496-756032 (Clockwise)

Preceding gene: 225630440

Following gene: 225630459

Centisome position: 52.25

GC content: 32.22

Gene sequence:

>537_bases
ATGAAATCTAGCCTTTTTTGGAAATTGTTAACAAGTTCAATAATACCAATAATATGCGTTATTGTTCTGTATCAGCACTT
TAGTACAGACCAATTATCAAAAGATGTGCCAATAAAAAGTAAGGCAAGTGGCAATGATCTGGAAACATTATCTACTGCAG
CTGAAAAATGTAATTTAGATACTGTAAGATCCTTAATAAAAAATGTAGTAGATATCAATGCTACTCATCATTTTGGTGCA
ACATCATTACACTATGCTACAAGCGGAGGCTGTTTAGAAGTCGTAAAATTTCTAATTGAAGAAGGCATTGATGTAAATAC
TACTGATGCTTTTAGCTGGACAGCTCTGCACTATGCTGCACGAAAAGGACATCTGGAAATTGCTAAATTTCTACTGAAAA
ATGGAGCAAATCCTTCTGCTAAAAACAAAGATAAAAAAACTCCTTTAGATCTTGCTGTAGAGGAATTAAACAATAATAAA
GAAGATATCTATGAGGAAATTATCAATTTACTTTCCAACTATCAATTATTCCCGTAA

Upstream 100 bases:

>100_bases
TATACATATACAAGATTCATCAAAAATACGTCCAAAAAATCTTTTCTAAAATAAAGTTAATTAGTTGCACTAAACAAGCG
ATGTAAATAATATAATCAAC

Downstream 100 bases:

>100_bases
CAATAGTACGATAGCCAAGGTTATCAATTACATGCTCAGCCCTATTTATTATCCATTTACCATAAACTCCTTTGCGAAAT
CCAGAAAGATTAATCTTTGC

Product: ankyrin repeat domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKSSLFWKLLTSSIIPIICVIVLYQHFSTDQLSKDVPIKSKASGNDLETLSTAAEKCNLDTVRSLIKNVVDINATHHFGA
TSLHYATSGGCLEVVKFLIEEGIDVNTTDAFSWTALHYAARKGHLEIAKFLLKNGANPSAKNKDKKTPLDLAVEELNNNK
EDIYEEIINLLSNYQLFP

Sequences:

>Translated_178_residues
MKSSLFWKLLTSSIIPIICVIVLYQHFSTDQLSKDVPIKSKASGNDLETLSTAAEKCNLDTVRSLIKNVVDINATHHFGA
TSLHYATSGGCLEVVKFLIEEGIDVNTTDAFSWTALHYAARKGHLEIAKFLLKNGANPSAKNKDKKTPLDLAVEELNNNK
EDIYEEIINLLSNYQLFP
>Mature_178_residues
MKSSLFWKLLTSSIIPIICVIVLYQHFSTDQLSKDVPIKSKASGNDLETLSTAAEKCNLDTVRSLIKNVVDINATHHFGA
TSLHYATSGGCLEVVKFLIEEGIDVNTTDAFSWTALHYAARKGHLEIAKFLLKNGANPSAKNKDKKTPLDLAVEELNNNK
EDIYEEIINLLSNYQLFP

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI87239981, Length=114, Percent_Identity=41.2280701754386, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI70780357, Length=120, Percent_Identity=36.6666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI70780355, Length=120, Percent_Identity=36.6666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI13376842, Length=120, Percent_Identity=38.3333333333333, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI70780353, Length=120, Percent_Identity=36.6666666666667, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI14149716, Length=81, Percent_Identity=48.1481481481481, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI70780359, Length=120, Percent_Identity=36.6666666666667, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI215598574, Length=120, Percent_Identity=36.6666666666667, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI52426737, Length=115, Percent_Identity=34.7826086956522, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI188595682, Length=115, Percent_Identity=34.7826086956522, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI52426735, Length=122, Percent_Identity=34.4262295081967, Blast_Score=76, Evalue=1e-14,
Organism=Homo sapiens, GI32967601, Length=127, Percent_Identity=33.8582677165354, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI219842212, Length=113, Percent_Identity=37.1681415929204, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI4505317, Length=113, Percent_Identity=37.1681415929204, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI268607506, Length=102, Percent_Identity=39.2156862745098, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI163914396, Length=113, Percent_Identity=36.283185840708, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI7705748, Length=113, Percent_Identity=36.283185840708, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI268607512, Length=95, Percent_Identity=41.0526315789474, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI268607514, Length=95, Percent_Identity=41.0526315789474, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI256574792, Length=106, Percent_Identity=35.8490566037736, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI148596917, Length=139, Percent_Identity=35.9712230215827, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI118498337, Length=84, Percent_Identity=45.2380952380952, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI20270347, Length=138, Percent_Identity=31.1594202898551, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI38569428, Length=119, Percent_Identity=30.2521008403361, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI38569426, Length=119, Percent_Identity=30.2521008403361, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI156142184, Length=108, Percent_Identity=36.1111111111111, Blast_Score=67, Evalue=6e-12,
Organism=Homo sapiens, GI41327754, Length=124, Percent_Identity=31.4516129032258, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI134948558, Length=103, Percent_Identity=38.8349514563107, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI56676397, Length=103, Percent_Identity=36.8932038834951, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI134948605, Length=103, Percent_Identity=38.8349514563107, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI30425444, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI38683816, Length=130, Percent_Identity=31.5384615384615, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI38683807, Length=130, Percent_Identity=31.5384615384615, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI166235148, Length=105, Percent_Identity=35.2380952380952, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI28626517, Length=117, Percent_Identity=34.1880341880342, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI223634006, Length=91, Percent_Identity=37.3626373626374, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI18640738, Length=120, Percent_Identity=36.6666666666667, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI217416347, Length=85, Percent_Identity=43.5294117647059, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI112799849, Length=92, Percent_Identity=36.9565217391304, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI14249672, Length=103, Percent_Identity=35.9223300970874, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI39812133, Length=125, Percent_Identity=30.4, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI37620163, Length=130, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI46519147, Length=130, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI157266328, Length=128, Percent_Identity=35.15625, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI4885643, Length=92, Percent_Identity=36.9565217391304, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI224809478, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809476, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI46519154, Length=130, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809472, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809470, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809468, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI46519151, Length=130, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI224809474, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI68131557, Length=134, Percent_Identity=32.8358208955224, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI32483404, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI8051599, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI8051595, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI8051597, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI8051593, Length=116, Percent_Identity=33.6206896551724, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI30348954, Length=129, Percent_Identity=29.4573643410853, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI38327522, Length=169, Percent_Identity=30.1775147928994, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=114, Percent_Identity=35.0877192982456, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI25145251, Length=114, Percent_Identity=35.0877192982456, Blast_Score=76, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17542700, Length=114, Percent_Identity=35.0877192982456, Blast_Score=76, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71981414, Length=114, Percent_Identity=35.0877192982456, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71981411, Length=114, Percent_Identity=35.0877192982456, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI212645194, Length=122, Percent_Identity=31.9672131147541, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71981154, Length=117, Percent_Identity=35.8974358974359, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71981141, Length=117, Percent_Identity=35.8974358974359, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71981147, Length=117, Percent_Identity=35.8974358974359, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17535267, Length=117, Percent_Identity=35.8974358974359, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71990824, Length=93, Percent_Identity=40.8602150537634, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17510899, Length=103, Percent_Identity=34.9514563106796, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71997655, Length=107, Percent_Identity=38.3177570093458, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71997649, Length=84, Percent_Identity=45.2380952380952, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533596, Length=138, Percent_Identity=34.0579710144928, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17561074, Length=115, Percent_Identity=35.6521739130435, Blast_Score=63, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322079, Length=96, Percent_Identity=41.6666666666667, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320470, Length=112, Percent_Identity=37.5, Blast_Score=65, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24583318, Length=94, Percent_Identity=43.6170212765958, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21356741, Length=171, Percent_Identity=33.9181286549708, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161084156, Length=113, Percent_Identity=37.1681415929204, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161084152, Length=113, Percent_Identity=37.1681415929204, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281366284, Length=113, Percent_Identity=37.1681415929204, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281366286, Length=113, Percent_Identity=37.1681415929204, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281366282, Length=113, Percent_Identity=37.1681415929204, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281359521, Length=122, Percent_Identity=35.2459016393443, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281359519, Length=122, Percent_Identity=35.2459016393443, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558752, Length=122, Percent_Identity=35.2459016393443, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558750, Length=122, Percent_Identity=35.2459016393443, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558756, Length=122, Percent_Identity=35.2459016393443, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558754, Length=122, Percent_Identity=35.2459016393443, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24666367, Length=106, Percent_Identity=34.9056603773585, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI161082089, Length=126, Percent_Identity=30.952380952381, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI161082092, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082085, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082099, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082110, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082081, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082096, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082106, Length=126, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573674, Length=116, Percent_Identity=35.3448275862069, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45550629, Length=125, Percent_Identity=29.6, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45550477, Length=116, Percent_Identity=35.3448275862069, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI78706564, Length=120, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI78706566, Length=120, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581260, Length=88, Percent_Identity=40.9090909090909, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24581258, Length=88, Percent_Identity=40.9090909090909, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI28571867, Length=108, Percent_Identity=37.962962962963, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI28571865, Length=108, Percent_Identity=37.962962962963, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 19767; Mature: 19767

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLFWKLLTSSIIPIICVIVLYQHFSTDQLSKDVPIKSKASGNDLETLSTAAEKCNLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHH
TVRSLIKNVVDINATHHFGATSLHYATSGGCLEVVKFLIEEGIDVNTTDAFSWTALHYAA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RKGHLEIAKFLLKNGANPSAKNKDKKTPLDLAVEELNNNKEDIYEEIINLLSNYQLFP
HCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSSLFWKLLTSSIIPIICVIVLYQHFSTDQLSKDVPIKSKASGNDLETLSTAAEKCNLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHH
TVRSLIKNVVDINATHHFGATSLHYATSGGCLEVVKFLIEEGIDVNTTDAFSWTALHYAA
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
RKGHLEIAKFLLKNGANPSAKNKDKKTPLDLAVEELNNNKEDIYEEIINLLSNYQLFP
HCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA