| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630369
Identifier: 225630369
GI number: 225630369
Start: 637456
End: 638184
Strand: Direct
Name: 225630369
Synonym: WRi_005930
Alternate gene names: NA
Gene position: 637456-638184 (Clockwise)
Preceding gene: 225630366
Following gene: 225630370
Centisome position: 44.09
GC content: 34.16
Gene sequence:
>729_bases ATGAAGGACAAGCCGGTTCGAGAAAAGAAGGACTTAGATAAGGGGCTCAAGCGTAGTGTGGGGAAACCTGCATGCTGCGT TTCTAAGGGAGGGAGTAGTAGCAATACTACTTCCTTACCTAACCAAGTTGCCAAAACTAAAGGCTTTGAAAAACGCGCTC AATATTACGCTGCTAAAGCTTATTCAAGGCAAGCTGATAAAGGTGATCAATATCAGGGTCTTAAAGAAATCATTTTTATA GCTATTGCTGATTGTATTCTCTTTCCTAATAAATCTGAGTATAAGTCAGATCATGTAATGTTAGACAAAGATAGCTATGA ACATGATTTAAAAGATTTTTATTTTACATTTATTGAGTTACCAAAATTTCCTAAAACTAAAGAAGACCAATTGGAGAGTA TAGTTGAAAAATGGATCTATTATTTTAAATATGCAGATGAAACTAGCGAAGAAGAATTGGAAAAGATAATAGGTAGTGAT GTAATAATTAAAAAGGCATATGAAGAACTAAATAGATTCAACTGGTCAGAGAAAGAATTTATTGCCTACGAACAGGAAAT AAAACGTATTCGTGATGAACGGGCTGTTCTTGAACAAAAACTTGATGATGCTAAAAAGGAAGGAAAAATTGAAGTTGCAA AAACAATGCTAGCTAATAATGTTGATGTCACCACTATTGTTAAGTTTACTGGCCTCTCCATGAGTGAGATCAAAGAATTG CAGAATTAA
Upstream 100 bases:
>100_bases ATGAAAGAGTGAAACAAACAAAAATGTTAGCAAGCTCTTTCTCAAGAGAAGGTTCTCTACTGTTGGTGTCACCATTAAGA ATGATGTTTTCTGAGGAATC
Downstream 100 bases:
>100_bases GTGGACCCGCAAACGGTTACACGAAATAATGCTGCAGCCTGACCAGATGATAAGTACATTTGTATCCGTTCAGCGGAGTG GCAGAATAAGGTAGACAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQVAKTKGFEKRAQYYAAKAYSRQADKGDQYQGLKEIIFI AIADCILFPNKSEYKSDHVMLDKDSYEHDLKDFYFTFIELPKFPKTKEDQLESIVEKWIYYFKYADETSEEELEKIIGSD VIIKKAYEELNRFNWSEKEFIAYEQEIKRIRDERAVLEQKLDDAKKEGKIEVAKTMLANNVDVTTIVKFTGLSMSEIKEL QN
Sequences:
>Translated_242_residues MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQVAKTKGFEKRAQYYAAKAYSRQADKGDQYQGLKEIIFI AIADCILFPNKSEYKSDHVMLDKDSYEHDLKDFYFTFIELPKFPKTKEDQLESIVEKWIYYFKYADETSEEELEKIIGSD VIIKKAYEELNRFNWSEKEFIAYEQEIKRIRDERAVLEQKLDDAKKEGKIEVAKTMLANNVDVTTIVKFTGLSMSEIKEL QN >Mature_242_residues MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQVAKTKGFEKRAQYYAAKAYSRQADKGDQYQGLKEIIFI AIADCILFPNKSEYKSDHVMLDKDSYEHDLKDFYFTFIELPKFPKTKEDQLESIVEKWIYYFKYADETSEEELEKIIGSD VIIKKAYEELNRFNWSEKEFIAYEQEIKRIRDERAVLEQKLDDAKKEGKIEVAKTMLANNVDVTTIVKFTGLSMSEIKEL QN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28038; Mature: 28038
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQVAKTKGFEKRAQYYAAKA CCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH YSRQADKGDQYQGLKEIIFIAIADCILFPNKSEYKSDHVMLDKDSYEHDLKDFYFTFIEL HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHC PKFPKTKEDQLESIVEKWIYYFKYADETSEEELEKIIGSDVIIKKAYEELNRFNWSEKEF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHH IAYEQEIKRIRDERAVLEQKLDDAKKEGKIEVAKTMLANNVDVTTIVKFTGLSMSEIKEL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH QN CC >Mature Secondary Structure MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQVAKTKGFEKRAQYYAAKA CCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH YSRQADKGDQYQGLKEIIFIAIADCILFPNKSEYKSDHVMLDKDSYEHDLKDFYFTFIEL HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHC PKFPKTKEDQLESIVEKWIYYFKYADETSEEELEKIIGSDVIIKKAYEELNRFNWSEKEF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHH IAYEQEIKRIRDERAVLEQKLDDAKKEGKIEVAKTMLANNVDVTTIVKFTGLSMSEIKEL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH QN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA