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The map label for this gene is 225630354

Identifier: 225630354

GI number: 225630354

Start: 619593

End: 620582

Strand: Direct

Name: 225630354

Synonym: WRi_005770

Alternate gene names: NA

Gene position: 619593-620582 (Clockwise)

Preceding gene: 225630353

Following gene: 225630355

Centisome position: 42.85

GC content: 32.42

Gene sequence:

>990_bases
ATGAAAGCATTGCAAAAAAATGGTTTTTTTATTATCAAAAATCTAGTTCCTTTAGAGTTAATAACTCAGTCTTTAAATGA
TATAATAAGCAAGATATCAAAGTTATCTCAAGAATTAGGTGTTTCAACTTCTGACTATTTAAACTGCACTGGAAGATGGG
GTACATCATCTCAGGTAACTAGAATTGTATCTCAAGTATTAGATAAAATTATTAAAAATTATCTTGAAAAGTCACTTCAA
TGCCAGATACTGCAGAAAAAATCAAATGTTATATGTAAAACTGCTGATTTAATAGATGCAGTTCCCTTCCATCAGGACAT
CTCTTATAGCTTTAATGACCCTTATCATTTTTCTGTTTGGCTAGCTTTGAATAATGTCAATAAAACTTCAGGTGCACTAC
AAGTTATAGAAGATAGTCACAACTGGAAAATACAGCCTCTAGTTGATTTTTGGCATCCATACTTTTTGGATCAATACTCG
GATAACCGGGAAAATTATAAAATTAAGTCACTACCTATTTCAGCAGGAGATGCGATAGTTTTTGATTCACGGTTATGGCA
TGGTAGTGATAAGAATATAGATGCTAAAGATAGGTTTGCTTATGTTACGAGATGGGTTGTAAAAGATAAAAGTCTTCCTT
GTGTGCCAAAACCTCAGCCTTCAGTTTTTGGTATATTAAACTGTGGTGCATTAACAGAATTTATACTGAGAGAATACTTA
TCATTATTTCGTCGCCAGGAAAGTATAAAAACAAAAAATATGGAAGAACTTATTAAGAGCTGGTTAGCCTTTATTACAGA
CACAACTACAAATATTTCTGAGGTCAACACTGCTGAAGCTAAGCGAGATTTATATAAGCTACTTATTCTGAATCAAGCGT
CAGCACTACATGATGCTGGAGACATTTCAGGAAAAATATACAAAAATTTATGGTTTTCACTGCTTGTATTTCTCAATAAA
AAAGTCAATGTGGTGGAGCTAGCATTATAA

Upstream 100 bases:

>100_bases
CGATTGGAAAAGAATACTAAAACAAGTAAAAGGGCTTAAAATTTTTAGTATTGTACCTTTAACAGATTATTTATCAGTTA
TTGACATTAGGTGTTAATAT

Downstream 100 bases:

>100_bases
ATGAACAAAAGTAGAGTTGGTAGTTTCAAGTATATATTGGTGTTCATTTTGAATATCTTATCCAAGTTTAAGCTTAATGT
GCTTGTAATGTTCCTGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKALQKNGFFIIKNLVPLELITQSLNDIISKISKLSQELGVSTSDYLNCTGRWGTSSQVTRIVSQVLDKIIKNYLEKSLQ
CQILQKKSNVICKTADLIDAVPFHQDISYSFNDPYHFSVWLALNNVNKTSGALQVIEDSHNWKIQPLVDFWHPYFLDQYS
DNRENYKIKSLPISAGDAIVFDSRLWHGSDKNIDAKDRFAYVTRWVVKDKSLPCVPKPQPSVFGILNCGALTEFILREYL
SLFRRQESIKTKNMEELIKSWLAFITDTTTNISEVNTAEAKRDLYKLLILNQASALHDAGDISGKIYKNLWFSLLVFLNK
KVNVVELAL

Sequences:

>Translated_329_residues
MKALQKNGFFIIKNLVPLELITQSLNDIISKISKLSQELGVSTSDYLNCTGRWGTSSQVTRIVSQVLDKIIKNYLEKSLQ
CQILQKKSNVICKTADLIDAVPFHQDISYSFNDPYHFSVWLALNNVNKTSGALQVIEDSHNWKIQPLVDFWHPYFLDQYS
DNRENYKIKSLPISAGDAIVFDSRLWHGSDKNIDAKDRFAYVTRWVVKDKSLPCVPKPQPSVFGILNCGALTEFILREYL
SLFRRQESIKTKNMEELIKSWLAFITDTTTNISEVNTAEAKRDLYKLLILNQASALHDAGDISGKIYKNLWFSLLVFLNK
KVNVVELAL
>Mature_329_residues
MKALQKNGFFIIKNLVPLELITQSLNDIISKISKLSQELGVSTSDYLNCTGRWGTSSQVTRIVSQVLDKIIKNYLEKSLQ
CQILQKKSNVICKTADLIDAVPFHQDISYSFNDPYHFSVWLALNNVNKTSGALQVIEDSHNWKIQPLVDFWHPYFLDQYS
DNRENYKIKSLPISAGDAIVFDSRLWHGSDKNIDAKDRFAYVTRWVVKDKSLPCVPKPQPSVFGILNCGALTEFILREYL
SLFRRQESIKTKNMEELIKSWLAFITDTTTNISEVNTAEAKRDLYKLLILNQASALHDAGDISGKIYKNLWFSLLVFLNK
KVNVVELAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37617; Mature: 37617

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALQKNGFFIIKNLVPLELITQSLNDIISKISKLSQELGVSTSDYLNCTGRWGTSSQVT
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCHHHHH
RIVSQVLDKIIKNYLEKSLQCQILQKKSNVICKTADLIDAVPFHQDISYSFNDPYHFSVW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCEEEEEE
LALNNVNKTSGALQVIEDSHNWKIQPLVDFWHPYFLDQYSDNRENYKIKSLPISAGDAIV
EEEECCCCCCCCEEEEECCCCEEEEHHHHHHCHHHHHHCCCCCCCEEEEEECCCCCCEEE
FDSRLWHGSDKNIDAKDRFAYVTRWVVKDKSLPCVPKPQPSVFGILNCGALTEFILREYL
EECEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHH
SLFRRQESIKTKNMEELIKSWLAFITDTTTNISEVNTAEAKRDLYKLLILNQASALHDAG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
DISGKIYKNLWFSLLVFLNKKVNVVELAL
CCCHHHHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MKALQKNGFFIIKNLVPLELITQSLNDIISKISKLSQELGVSTSDYLNCTGRWGTSSQVT
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCHHHHH
RIVSQVLDKIIKNYLEKSLQCQILQKKSNVICKTADLIDAVPFHQDISYSFNDPYHFSVW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCEEEEEE
LALNNVNKTSGALQVIEDSHNWKIQPLVDFWHPYFLDQYSDNRENYKIKSLPISAGDAIV
EEEECCCCCCCCEEEEECCCCEEEEHHHHHHCHHHHHHCCCCCCCEEEEEECCCCCCEEE
FDSRLWHGSDKNIDAKDRFAYVTRWVVKDKSLPCVPKPQPSVFGILNCGALTEFILREYL
EECEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHH
SLFRRQESIKTKNMEELIKSWLAFITDTTTNISEVNTAEAKRDLYKLLILNQASALHDAG
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
DISGKIYKNLWFSLLVFLNKKVNVVELAL
CCCHHHHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA