| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630331
Identifier: 225630331
GI number: 225630331
Start: 589799
End: 590803
Strand: Reverse
Name: 225630331
Synonym: WRi_005540
Alternate gene names: NA
Gene position: 590803-589799 (Counterclockwise)
Preceding gene: 225630332
Following gene: 225630330
Centisome position: 40.86
GC content: 39.1
Gene sequence:
>1005_bases ATGCAAAATCCATTTACAAATACAGCATTTAGCATGACGGCACTAACAAATGCGATAAATATATTGCCGATAAATTATGG ACGAGTTGAAAATTTAAATTTGTTTCCAAGTAGGTCAGTAAGATTTAGACATATTACTATAGAGGAGCAAAATGGAGTAT TAAGTTTACTACCAACGCAGTTACCAGGAGCACCAGCAACAGTAGGAAAACGTGGAAAACGAAAAATAAGAACTTTTACC ATTCCACATATACCACATGATGACGTAGTGTTGCCTGAGGAAGTACAGGGAATAAGGGCATTTGGGTCAGAAAGTGAACT GAAAGCATTGGCAGATGTAATAACTGATCATTTGCAGCTAATGAGAAATAAACACGCAATAACGTTAGAACATTTGAGAA TGGGAGCGCTGAAGGGAATCATTCTTGATGCTGATGGGTCGGAGTTATTAAACCTTTACAACGAATTTGAAATTACACCA AAAGTAGTAAATTTTGCATTGGGGACTGCGACAACCGATGTAAAGCGTAAGTGTCTGGAAGTATTGCGCCATGTTGAGGA CAATTTAAGTGGTGAATATATGACGGGGATTCATGCACTGGTAAGTCCAGAGTTTTTTGATGCACTAATTTCGCATAGTA AAGTGAAAGAGGCATATGAAAGATGGCAAGAAGGAGCAGCGCTGAGGAATGACATGAGATCAGGATTTACGTTCTGTGGA ATAACATTTGAAGAGTATAGAGGGCAAGCAACCGACCCTGAAGGAACCGTAAGAAGATTTATAGAAAGAGAAAGTGGAAA CTGTTTTCCACTAGGAACAGCGAGCACATTTACAACGTATTTTGCACCAGCAGACTTTAATGAGACAGTAAATACTCTTG GACAGCCACTTTACGCGAAACAAGAGCCAAGAAGATTTGATAGAGGGACCGATTTACATACTCAGTCAAATTCTCTGCCA ATGTGCCATAGACCGGGAGTATTAGTAAAAGTCGTTGTAACATAA
Upstream 100 bases:
>100_bases CAGAAAACTGCAGCAATAAAGCACCTTGAAGGACGAGGGATCATTATCCGCAAGGGAGCTTAAAAAAACTATTAAAAATA CAAAAGGGGGAAAAGAAAAA
Downstream 100 bases:
>100_bases CAACACAGGTAGAGCAACTATAAAGTGGTGAGGCAGAAGAATGCTTTACCTGTGTGCCCCTTCTTAGCATGTAAAGGTTA GTATATAGCAGAAAAATATG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQLPGAPATVGKRGKRKIRTFT IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGTATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNSLP MCHRPGVLVKVVVT
Sequences:
>Translated_334_residues MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQLPGAPATVGKRGKRKIRTFT IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGTATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNSLP MCHRPGVLVKVVVT >Mature_334_residues MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQLPGAPATVGKRGKRKIRTFT IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGTATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNSLP MCHRPGVLVKVVVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37388; Mature: 37388
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQ CCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC LPGAPATVGKRGKRKIRTFTIPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQL CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGTATTDVKRKCLE HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH VLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK EEHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCCCCC QEPRRFDRGTDLHTQSNSLPMCHRPGVLVKVVVT CCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQ CCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC LPGAPATVGKRGKRKIRTFTIPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQL CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGTATTDVKRKCLE HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH VLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK EEHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCCCCC QEPRRFDRGTDLHTQSNSLPMCHRPGVLVKVVVT CCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA