Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630331

Identifier: 225630331

GI number: 225630331

Start: 589799

End: 590803

Strand: Reverse

Name: 225630331

Synonym: WRi_005540

Alternate gene names: NA

Gene position: 590803-589799 (Counterclockwise)

Preceding gene: 225630332

Following gene: 225630330

Centisome position: 40.86

GC content: 39.1

Gene sequence:

>1005_bases
ATGCAAAATCCATTTACAAATACAGCATTTAGCATGACGGCACTAACAAATGCGATAAATATATTGCCGATAAATTATGG
ACGAGTTGAAAATTTAAATTTGTTTCCAAGTAGGTCAGTAAGATTTAGACATATTACTATAGAGGAGCAAAATGGAGTAT
TAAGTTTACTACCAACGCAGTTACCAGGAGCACCAGCAACAGTAGGAAAACGTGGAAAACGAAAAATAAGAACTTTTACC
ATTCCACATATACCACATGATGACGTAGTGTTGCCTGAGGAAGTACAGGGAATAAGGGCATTTGGGTCAGAAAGTGAACT
GAAAGCATTGGCAGATGTAATAACTGATCATTTGCAGCTAATGAGAAATAAACACGCAATAACGTTAGAACATTTGAGAA
TGGGAGCGCTGAAGGGAATCATTCTTGATGCTGATGGGTCGGAGTTATTAAACCTTTACAACGAATTTGAAATTACACCA
AAAGTAGTAAATTTTGCATTGGGGACTGCGACAACCGATGTAAAGCGTAAGTGTCTGGAAGTATTGCGCCATGTTGAGGA
CAATTTAAGTGGTGAATATATGACGGGGATTCATGCACTGGTAAGTCCAGAGTTTTTTGATGCACTAATTTCGCATAGTA
AAGTGAAAGAGGCATATGAAAGATGGCAAGAAGGAGCAGCGCTGAGGAATGACATGAGATCAGGATTTACGTTCTGTGGA
ATAACATTTGAAGAGTATAGAGGGCAAGCAACCGACCCTGAAGGAACCGTAAGAAGATTTATAGAAAGAGAAAGTGGAAA
CTGTTTTCCACTAGGAACAGCGAGCACATTTACAACGTATTTTGCACCAGCAGACTTTAATGAGACAGTAAATACTCTTG
GACAGCCACTTTACGCGAAACAAGAGCCAAGAAGATTTGATAGAGGGACCGATTTACATACTCAGTCAAATTCTCTGCCA
ATGTGCCATAGACCGGGAGTATTAGTAAAAGTCGTTGTAACATAA

Upstream 100 bases:

>100_bases
CAGAAAACTGCAGCAATAAAGCACCTTGAAGGACGAGGGATCATTATCCGCAAGGGAGCTTAAAAAAACTATTAAAAATA
CAAAAGGGGGAAAAGAAAAA

Downstream 100 bases:

>100_bases
CAACACAGGTAGAGCAACTATAAAGTGGTGAGGCAGAAGAATGCTTTACCTGTGTGCCCCTTCTTAGCATGTAAAGGTTA
GTATATAGCAGAAAAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQLPGAPATVGKRGKRKIRTFT
IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP
KVVNFALGTATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG
ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNSLP
MCHRPGVLVKVVVT

Sequences:

>Translated_334_residues
MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQLPGAPATVGKRGKRKIRTFT
IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP
KVVNFALGTATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG
ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNSLP
MCHRPGVLVKVVVT
>Mature_334_residues
MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQLPGAPATVGKRGKRKIRTFT
IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP
KVVNFALGTATTDVKRKCLEVLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG
ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQEPRRFDRGTDLHTQSNSLP
MCHRPGVLVKVVVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37388; Mature: 37388

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQ
CCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC
LPGAPATVGKRGKRKIRTFTIPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQL
CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGTATTDVKRKCLE
HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
VLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG
HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK
EEHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCCCCC
QEPRRFDRGTDLHTQSNSLPMCHRPGVLVKVVVT
CCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MQNPFTNTAFSMTALTNAINILPINYGRVENLNLFPSRSVRFRHITIEEQNGVLSLLPTQ
CCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC
LPGAPATVGKRGKRKIRTFTIPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQL
CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGTATTDVKRKCLE
HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
VLRHVEDNLSGEYMTGIHALVSPEFFDALISHSKVKEAYERWQEGAALRNDMRSGFTFCG
HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ITFEEYRGQATDPEGTVRRFIERESGNCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK
EEHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCCCCC
QEPRRFDRGTDLHTQSNSLPMCHRPGVLVKVVVT
CCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA