| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630329
Identifier: 225630329
GI number: 225630329
Start: 588873
End: 589394
Strand: Reverse
Name: 225630329
Synonym: WRi_005520
Alternate gene names: NA
Gene position: 589394-588873 (Counterclockwise)
Preceding gene: 225630330
Following gene: 225630328
Centisome position: 40.76
GC content: 32.76
Gene sequence:
>522_bases ATGTCTATTAATATAGAAGTTACCGATAATATTAATAAGGTAATTGAAAATGTAAATGCTGAAAGGAAAAAAGTGGAAAA AGCAGCGGTGAGGGCATTGAACAAAACAGCACTATGGTTAAAAACGCAAGCAGCTAAGGAAATTAGTGAGGAAAAGAAGA TAAAATTAACGGTAATGAGAAAAAGGCTAAGAATTTTTAAGGCTAAGACAAGTAGGTTAGATGTATTAATGAGAGCAAAT TTATATGATATTAGGGTATCAGCAATTGGCAAGATGAGACAAACAAGAAAAGGAGCGAAAGTAGGAAAACATAAGTTTAT AGGAGGATTTATGGCAACAATGCCAAGAGGAAATAGTGGTGTTTTTAGGCGTGAAGGAAGAACAGCTTTGCCAATACAAG AGGTAAAATTAGGACTGGAACCAGAAGCATCAAAAATAATAAAGGAGCTAGTTAATTATGAAACAGAAGGGATATTTGAG AAATATTTTGAGCGTGAATTAAACTATATTGTAAAAGTATGA
Upstream 100 bases:
>100_bases GATACTTTTTCCATAGGTAGTTGTAGATACAGAGTACACACACCACCACTTAGAGATAATTCAGGAATGGTATGGAAAAT TCAAGCATCGGGGGTGTAAA
Downstream 100 bases:
>100_bases TTTTAATTGAGTTGCACAAAGCAATTTGCAGAATGTTGAAGAAAGAAATACCAGCGATACAGACATGTGAAATATATCCA ATGATAAGAAGGGAAATAGT
Product: minor tail protein Z, putative
Products: NA
Alternate protein names: Prophage LambdaW1 Minor Tail Protein Z; Prophage LambdaW5 Minor Tail Protein Z; Puative Minor Tail Protein Z
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSINIEVTDNINKVIENVNAERKKVEKAAVRALNKTALWLKTQAAKEISEEKKIKLTVMRKRLRIFKAKTSRLDVLMRAN LYDIRVSAIGKMRQTRKGAKVGKHKFIGGFMATMPRGNSGVFRREGRTALPIQEVKLGLEPEASKIIKELVNYETEGIFE KYFERELNYIVKV
Sequences:
>Translated_173_residues MSINIEVTDNINKVIENVNAERKKVEKAAVRALNKTALWLKTQAAKEISEEKKIKLTVMRKRLRIFKAKTSRLDVLMRAN LYDIRVSAIGKMRQTRKGAKVGKHKFIGGFMATMPRGNSGVFRREGRTALPIQEVKLGLEPEASKIIKELVNYETEGIFE KYFERELNYIVKV >Mature_172_residues SINIEVTDNINKVIENVNAERKKVEKAAVRALNKTALWLKTQAAKEISEEKKIKLTVMRKRLRIFKAKTSRLDVLMRANL YDIRVSAIGKMRQTRKGAKVGKHKFIGGFMATMPRGNSGVFRREGRTALPIQEVKLGLEPEASKIIKELVNYETEGIFEK YFERELNYIVKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19867; Mature: 19736
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINIEVTDNINKVIENVNAERKKVEKAAVRALNKTALWLKTQAAKEISEEKKIKLTVMR CEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRLRIFKAKTSRLDVLMRANLYDIRVSAIGKMRQTRKGAKVGKHKFIGGFMATMPRGNSG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VFRREGRTALPIQEVKLGLEPEASKIIKELVNYETEGIFEKYFERELNYIVKV CEECCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SINIEVTDNINKVIENVNAERKKVEKAAVRALNKTALWLKTQAAKEISEEKKIKLTVMR EEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRLRIFKAKTSRLDVLMRANLYDIRVSAIGKMRQTRKGAKVGKHKFIGGFMATMPRGNSG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VFRREGRTALPIQEVKLGLEPEASKIIKELVNYETEGIFEKYFERELNYIVKV CEECCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA