| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630327
Identifier: 225630327
GI number: 225630327
Start: 587949
End: 588413
Strand: Reverse
Name: 225630327
Synonym: WRi_005500
Alternate gene names: NA
Gene position: 588413-587949 (Counterclockwise)
Preceding gene: 225630328
Following gene: 225630326
Centisome position: 40.7
GC content: 33.76
Gene sequence:
>465_bases ATGTTGGAAAGTAATTTTGCTATTTCAGAGTTGCAAAGAAAGTTAGCTAACATTGTACGTATTGGGCTTGTGAAAGAAGT AGATTATGAAAAAGCGAGAGTAAAAGTGCAAATAGGGGAATTTTTAACAGATTGGTTGCCATGGATAACAAGTAAAGCAG GAAAAGATAGAAATTGGTCTCCTCCAGATATCGATGAACAGGTTATTATACTTTCTGCGCTAGGAGAACTATCATTAGGG GTGGTATTAGCAGGAATATATCAGGAAAAATACCCTGCACCAGAGAATAAAAAAGAAATAAATAGTGTAAAAATTCAAGA TGGGACAAGATTGTTATATGATAAAGAGAAGCATCATTTAGAGATTGAAGTAGTGGACAAAATAACATTGAAAGCTGGGG AATCAAGTATAGAGATGACAAGGAGCGAAATAAAACTGAAAGCAGATAGAATAGAACTTAATTAA
Upstream 100 bases:
>100_bases TTAGTGTGGATGGTAGACTGGGTGCATGAAGTACACTTGGGTCGATCTATTTGGGAAGAGGGAAAATTTATGCCACACAA AATAGAAATCGGTGAAATAA
Downstream 100 bases:
>100_bases TTGGAAAATGAATAAATCAGTTGTGCGAGTAGGAGATTATTGTGGAGAAGCAACACCACATTTTTGCATTAGCGGCAGTA ATAATGTTTTTGTAAATGAT
Product: baseplate assembly protein V
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Phage-Related Baseplate Assembly Protein V; Baseplate Assembly Protein GpV; Pyocin R2_PP; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; LOW QUALITY PROTEIN Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage P2 Baseplate Assembly Protein GPV; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage Baseplate Protein; Phage P2 Baseplate Assembly Protein GpV
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWSPPDIDEQVIILSALGELSLG VVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHLEIEVVDKITLKAGESSIEMTRSEIKLKADRIELN
Sequences:
>Translated_154_residues MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWSPPDIDEQVIILSALGELSLG VVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHLEIEVVDKITLKAGESSIEMTRSEIKLKADRIELN >Mature_154_residues MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWSPPDIDEQVIILSALGELSLG VVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHLEIEVVDKITLKAGESSIEMTRSEIKLKADRIELN
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17543; Mature: 17543
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCCC PPDIDEQVIILSALGELSLGVVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHL CCCCCCCEEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCEE EIEVVDKITLKAGESSIEMTRSEIKLKADRIELN EEEEEEEEEECCCCCHHHHHHHHHEEEEEEEECC >Mature Secondary Structure MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWS CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCCC PPDIDEQVIILSALGELSLGVVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHL CCCCCCCEEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCEE EIEVVDKITLKAGESSIEMTRSEIKLKADRIELN EEEEEEEEEECCCCCHHHHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA