Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630327

Identifier: 225630327

GI number: 225630327

Start: 587949

End: 588413

Strand: Reverse

Name: 225630327

Synonym: WRi_005500

Alternate gene names: NA

Gene position: 588413-587949 (Counterclockwise)

Preceding gene: 225630328

Following gene: 225630326

Centisome position: 40.7

GC content: 33.76

Gene sequence:

>465_bases
ATGTTGGAAAGTAATTTTGCTATTTCAGAGTTGCAAAGAAAGTTAGCTAACATTGTACGTATTGGGCTTGTGAAAGAAGT
AGATTATGAAAAAGCGAGAGTAAAAGTGCAAATAGGGGAATTTTTAACAGATTGGTTGCCATGGATAACAAGTAAAGCAG
GAAAAGATAGAAATTGGTCTCCTCCAGATATCGATGAACAGGTTATTATACTTTCTGCGCTAGGAGAACTATCATTAGGG
GTGGTATTAGCAGGAATATATCAGGAAAAATACCCTGCACCAGAGAATAAAAAAGAAATAAATAGTGTAAAAATTCAAGA
TGGGACAAGATTGTTATATGATAAAGAGAAGCATCATTTAGAGATTGAAGTAGTGGACAAAATAACATTGAAAGCTGGGG
AATCAAGTATAGAGATGACAAGGAGCGAAATAAAACTGAAAGCAGATAGAATAGAACTTAATTAA

Upstream 100 bases:

>100_bases
TTAGTGTGGATGGTAGACTGGGTGCATGAAGTACACTTGGGTCGATCTATTTGGGAAGAGGGAAAATTTATGCCACACAA
AATAGAAATCGGTGAAATAA

Downstream 100 bases:

>100_bases
TTGGAAAATGAATAAATCAGTTGTGCGAGTAGGAGATTATTGTGGAGAAGCAACACCACATTTTTGCATTAGCGGCAGTA
ATAATGTTTTTGTAAATGAT

Product: baseplate assembly protein V

Products: NA

Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Phage-Related Baseplate Assembly Protein V; Baseplate Assembly Protein GpV; Pyocin R2_PP; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; LOW QUALITY PROTEIN Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage P2 Baseplate Assembly Protein GPV; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage Baseplate Protein; Phage P2 Baseplate Assembly Protein GpV

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWSPPDIDEQVIILSALGELSLG
VVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHLEIEVVDKITLKAGESSIEMTRSEIKLKADRIELN

Sequences:

>Translated_154_residues
MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWSPPDIDEQVIILSALGELSLG
VVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHLEIEVVDKITLKAGESSIEMTRSEIKLKADRIELN
>Mature_154_residues
MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWSPPDIDEQVIILSALGELSLG
VVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHLEIEVVDKITLKAGESSIEMTRSEIKLKADRIELN

Specific function: Unknown

COG id: COG4540

COG function: function code R; Phage P2 baseplate assembly protein gpV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17543; Mature: 17543

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCCC
PPDIDEQVIILSALGELSLGVVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHL
CCCCCCCEEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCEE
EIEVVDKITLKAGESSIEMTRSEIKLKADRIELN
EEEEEEEEEECCCCCHHHHHHHHHEEEEEEEECC
>Mature Secondary Structure
MLESNFAISELQRKLANIVRIGLVKEVDYEKARVKVQIGEFLTDWLPWITSKAGKDRNWS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCCC
PPDIDEQVIILSALGELSLGVVLAGIYQEKYPAPENKKEINSVKIQDGTRLLYDKEKHHL
CCCCCCCEEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCEE
EIEVVDKITLKAGESSIEMTRSEIKLKADRIELN
EEEEEEEEEECCCCCHHHHHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA