Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630314

Identifier: 225630314

GI number: 225630314

Start: 567035

End: 567808

Strand: Direct

Name: 225630314

Synonym: WRi_005340

Alternate gene names: NA

Gene position: 567035-567808 (Clockwise)

Preceding gene: 225630313

Following gene: 225630315

Centisome position: 39.22

GC content: 36.56

Gene sequence:

>774_bases
ATGAAGGACAAGCCGGTTCGAGAAAAGAAGGACTTAGATAAGGGGCTCAAGCGTAGTGTGGGGAAACCTGCATGCTGCGT
TTCTAAGGGAGGGAGTAGTAGCAATACTACTTCCTTACCTAACCAGCTCGCTAAAACTAAGGGCTTTGAAAAACGTGCTC
AATACTATGCTGCTAAAGCCTATTCAAGACAGGCTGACAAAGGCGATCAATATCATGACCTTAAGGAAATTATCTTTATT
GCTATAGCAGACTGTATTTTATTTCCTGATAAGTCTGAGTATAAGTCAAAGCATACCATTCGCGATGAAGATACTAATGA
ACATGATCTAAAAGATTTTTACTTTATATTTATTGAGTTGCCTAAATTTCCAAAAACCAAAGAAGATCAGCTTTCAAGTA
TTGTTGAGAAATGGGTCTACTTCTTTAAATATGCAGATGAGACTAGTGAAGAAGAGCTGGAAAAAATAATAGGTAGTGAT
CTAATAATTAAAAAGGCCTATGAAGAACTAAATAGGTTCAACTGGTCAGAAAAAGAATTTATTGCCTATGAACAGGAAAT
AAAACGTATTCTTGATGAACAGGCTGTCCTTGCTCAAAAACTTGATGATGCTACTGCAAAAGGCATCCTCATCGGACATG
AAAAAGGCAGAAAAGAGAGGGAAATTGAAGTTGCAAAGAATCTACTTAAAGCAGGAGTTTCTATTGATATCATAGCTCAA
ACTACTGGTCTTACAGCTAATGAAATTAAAGACTTAAGCTCTTTGGATGTTTAG

Upstream 100 bases:

>100_bases
ATGAAAGAGTGAAACAAACAAAAATGTTAGCAAGCTCTTTCTCAAGAGAAGGTTCTCTACTGTTGGTGTCACCATTAAGA
ATGATGTTTTCTGAGGAATC

Downstream 100 bases:

>100_bases
ATGAACATCTTTGTACTAGATGAAAACCCAGAGATTGCGGCAAAAATGTTATGTGATAAGCATATAGTAAAAATGCTATT
AGAAACTGCTCAGTTACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQLAKTKGFEKRAQYYAAKAYSRQADKGDQYHDLKEIIFI
AIADCILFPDKSEYKSKHTIRDEDTNEHDLKDFYFIFIELPKFPKTKEDQLSSIVEKWVYFFKYADETSEEELEKIIGSD
LIIKKAYEELNRFNWSEKEFIAYEQEIKRILDEQAVLAQKLDDATAKGILIGHEKGRKEREIEVAKNLLKAGVSIDIIAQ
TTGLTANEIKDLSSLDV

Sequences:

>Translated_257_residues
MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQLAKTKGFEKRAQYYAAKAYSRQADKGDQYHDLKEIIFI
AIADCILFPDKSEYKSKHTIRDEDTNEHDLKDFYFIFIELPKFPKTKEDQLSSIVEKWVYFFKYADETSEEELEKIIGSD
LIIKKAYEELNRFNWSEKEFIAYEQEIKRILDEQAVLAQKLDDATAKGILIGHEKGRKEREIEVAKNLLKAGVSIDIIAQ
TTGLTANEIKDLSSLDV
>Mature_257_residues
MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQLAKTKGFEKRAQYYAAKAYSRQADKGDQYHDLKEIIFI
AIADCILFPDKSEYKSKHTIRDEDTNEHDLKDFYFIFIELPKFPKTKEDQLSSIVEKWVYFFKYADETSEEELEKIIGSD
LIIKKAYEELNRFNWSEKEFIAYEQEIKRILDEQAVLAQKLDDATAKGILIGHEKGRKEREIEVAKNLLKAGVSIDIIAQ
TTGLTANEIKDLSSLDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29401; Mature: 29401

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQLAKTKGFEKRAQYYAAKA
CCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
YSRQADKGDQYHDLKEIIFIAIADCILFPDKSEYKSKHTIRDEDTNEHDLKDFYFIFIEL
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHEEEEEEEC
PKFPKTKEDQLSSIVEKWVYFFKYADETSEEELEKIIGSDLIIKKAYEELNRFNWSEKEF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHH
IAYEQEIKRILDEQAVLAQKLDDATAKGILIGHEKGRKEREIEVAKNLLKAGVSIDIIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC
TTGLTANEIKDLSSLDV
CCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKDKPVREKKDLDKGLKRSVGKPACCVSKGGSSSNTTSLPNQLAKTKGFEKRAQYYAAKA
CCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHH
YSRQADKGDQYHDLKEIIFIAIADCILFPDKSEYKSKHTIRDEDTNEHDLKDFYFIFIEL
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHEEEEEEEC
PKFPKTKEDQLSSIVEKWVYFFKYADETSEEELEKIIGSDLIIKKAYEELNRFNWSEKEF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHH
IAYEQEIKRILDEQAVLAQKLDDATAKGILIGHEKGRKEREIEVAKNLLKAGVSIDIIAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC
TTGLTANEIKDLSSLDV
CCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA