| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630270
Identifier: 225630270
GI number: 225630270
Start: 534389
End: 534724
Strand: Direct
Name: 225630270
Synonym: WRi_004880
Alternate gene names: NA
Gene position: 534389-534724 (Clockwise)
Preceding gene: 225630269
Following gene: 225630305
Centisome position: 36.96
GC content: 38.99
Gene sequence:
>336_bases ATGAGCTCTATAATAGGATTTTTTGGTGTTTTGTGTGTAGTATTGCTTTTCTCTTTCTCAGGTTATGCAGATAACCCTGG TGTTGATATGGATGACACAACTAAAGTAATATGCAATATTATTGGTTATGTTTGGGGGATAGGCGGTCCACTTATGACGG TAGTAATAATTGGTGCAGCTTTGCTTGCAATATTTGGCAGGATGCCGTGGCCAGCCCTCTTTGCTCTTGGCATGTTCTGT GGTGTATTTTTTGGCGCTAAAACTATCATAACGAAAATTATGCCCAACGTAAGCGATGAAGCAAAAACTATGTTGGAAAA GTGTGGACAAAAATAA
Upstream 100 bases:
>100_bases TGTAGCAACACTTATGTATGGACAAATTATAATTTTTACTTTAAAATAAAAATATGTGTAGGTTTAGGTTTGCGTTAATT TATTATTTAGAGGCAAAAAA
Downstream 100 bases:
>100_bases TCCAAAAAGTGCAGAAATGCTTTTTTGTTATCCATTAAACCGCTTCATATCTTCAACTTGCAACAAATAAGGGCTATCTT TTGGTAGAGTTTTAACAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSSIIGFFGVLCVVLLFSFSGYADNPGVDMDDTTKVICNIIGYVWGIGGPLMTVVIIGAALLAIFGRMPWPALFALGMFC GVFFGAKTIITKIMPNVSDEAKTMLEKCGQK
Sequences:
>Translated_111_residues MSSIIGFFGVLCVVLLFSFSGYADNPGVDMDDTTKVICNIIGYVWGIGGPLMTVVIIGAALLAIFGRMPWPALFALGMFC GVFFGAKTIITKIMPNVSDEAKTMLEKCGQK >Mature_110_residues SSIIGFFGVLCVVLLFSFSGYADNPGVDMDDTTKVICNIIGYVWGIGGPLMTVVIIGAALLAIFGRMPWPALFALGMFCG VFFGAKTIITKIMPNVSDEAKTMLEKCGQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11864; Mature: 11733
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIIGFFGVLCVVLLFSFSGYADNPGVDMDDTTKVICNIIGYVWGIGGPLMTVVIIGAA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLAIFGRMPWPALFALGMFCGVFFGAKTIITKIMPNVSDEAKTMLEKCGQK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SSIIGFFGVLCVVLLFSFSGYADNPGVDMDDTTKVICNIIGYVWGIGGPLMTVVIIGAA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LLAIFGRMPWPALFALGMFCGVFFGAKTIITKIMPNVSDEAKTMLEKCGQK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA