| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is purA [H]
Identifier: 225630237
GI number: 225630237
Start: 479852
End: 481129
Strand: Direct
Name: purA [H]
Synonym: WRi_004490
Alternate gene names: 225630237
Gene position: 479852-481129 (Clockwise)
Preceding gene: 225630236
Following gene: 225630238
Centisome position: 33.19
GC content: 35.99
Gene sequence:
>1278_bases ATGAATAATATTGTAATTGTTGGTCTGCAATGGGGTGACGAAGGCAAGGGTAAAATAGTAGATTATCTTTCTGAGAATGC AGATGTAGTTGTGAGATTTCAGGGAGGAAATAATGCAGGGCACACTATAGTAGTAGATGATGAGGTTTATAAATTAAATT TACTGCCCTCTGCTGTTTTGAGGCCAGGCAAAATATCTATCATAGGAAATGGCGTTGCTCTTGATTCACACGCTCTAATC TCAGAAATAGAGTCATTGAAAGTTAAAGGAGTAGACGTAAACTATAACAACTTGATGGTATCTGAGAGCTGTCCATTAAT ACTTAGCGTACATAAGGACAAGGAAAAGCTATTTGAAGATTTAAATGGAAATCACAAAATTGGTACAACAAATAAAGGGA TAGGACCATGTTATGAAGATAAAGTTGGGAGGAGAGCTATACGCCTTTGTGACTTAGAAAACGCAGATGAGCTCAATAAA AGATTGGATACTCTTTTGAATTACCACAATGCTATCAGGAAAGGCCTTAACTACCAGGTAGTTAAAAAAGAAGAAATATT AAAGGAAATTCAAGAGATTTCAGAAAAAATTCTTTCATATAAAAAACCTGTGTGGAAGATATTAAATGACTTGATGAAAG AAGGTAAGAAAATAATATTTGAAGGTGCCCAAGGCGCATTTTTAGATATCGACCACGGAACTTACCCTTTTGTTACTTCA AGTAATACTGTAGCATCGCAAGCAATAACAGGCTCAGGGTTATCCTCCAATGCTTACATTATTGGTGTGGTAAAAGCTTA TACAACAAGAGTGGGCAATGGCCCATTTCCTACTGAGCAGAAAAATGAAGTAGGAGATAGCTTGTTTACTATAGGTAAGG AACTTGGAACAGTGAGCAATAGAAGAAGGCGTTGCGGATGGTTCGATGCAGTTTTAGTGCGCCAGGCCGTACAACTCTCT GGAGTTTCAAGCATTGTATTAACCAAATTAGATGTGCTTAATTCTTTTGATACAATTAAAATATGCACTGGTTACAAGTA TAGCGGAAAAATGTATGATTATTTACCCGCATCGCATTCAATACAAGGGGAATTAGAGCCAATATATGAAGAGTTTCCTG GCTGGAAAGAAAACACTCAAGGTAAAAGGTCGATTGAAACATTGCCTATCAATTTAATAAAATATATAGAAGGGTTAGAA AAATTAATAGGTGTACCAATTCATCTAATCTCAACTAGTCCAAAGAGAGAGGATGTTATTAAGCTTAAAGATTTCTGA
Upstream 100 bases:
>100_bases TTGGAAACTCTTTATTTAAGAGGTGTAGGAAAGGCGTAGATTTCTCTTTCCATTTGTAGCGTACTGCATTAATATTTATG TATTAATCTAGAAAATAATG
Downstream 100 bases:
>100_bases AAACGTCTTTGTATCTTAGAGCCTGTACGTAATCTCAAAAAAGAGATAAAGTGAGAGGATAAAGTATATAAAGTAGGATA TGCGAAGTTTATAACCAAGT
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNNIVIVGLQWGDEGKGKIVDYLSENADVVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVLRPGKISIIGNGVALDSHALI SEIESLKVKGVDVNYNNLMVSESCPLILSVHKDKEKLFEDLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNK RLDTLLNYHNAIRKGLNYQVVKKEEILKEIQEISEKILSYKKPVWKILNDLMKEGKKIIFEGAQGAFLDIDHGTYPFVTS SNTVASQAITGSGLSSNAYIIGVVKAYTTRVGNGPFPTEQKNEVGDSLFTIGKELGTVSNRRRRCGWFDAVLVRQAVQLS GVSSIVLTKLDVLNSFDTIKICTGYKYSGKMYDYLPASHSIQGELEPIYEEFPGWKENTQGKRSIETLPINLIKYIEGLE KLIGVPIHLISTSPKREDVIKLKDF
Sequences:
>Translated_425_residues MNNIVIVGLQWGDEGKGKIVDYLSENADVVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVLRPGKISIIGNGVALDSHALI SEIESLKVKGVDVNYNNLMVSESCPLILSVHKDKEKLFEDLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNK RLDTLLNYHNAIRKGLNYQVVKKEEILKEIQEISEKILSYKKPVWKILNDLMKEGKKIIFEGAQGAFLDIDHGTYPFVTS SNTVASQAITGSGLSSNAYIIGVVKAYTTRVGNGPFPTEQKNEVGDSLFTIGKELGTVSNRRRRCGWFDAVLVRQAVQLS GVSSIVLTKLDVLNSFDTIKICTGYKYSGKMYDYLPASHSIQGELEPIYEEFPGWKENTQGKRSIETLPINLIKYIEGLE KLIGVPIHLISTSPKREDVIKLKDF >Mature_425_residues MNNIVIVGLQWGDEGKGKIVDYLSENADVVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVLRPGKISIIGNGVALDSHALI SEIESLKVKGVDVNYNNLMVSESCPLILSVHKDKEKLFEDLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNK RLDTLLNYHNAIRKGLNYQVVKKEEILKEIQEISEKILSYKKPVWKILNDLMKEGKKIIFEGAQGAFLDIDHGTYPFVTS SNTVASQAITGSGLSSNAYIIGVVKAYTTRVGNGPFPTEQKNEVGDSLFTIGKELGTVSNRRRRCGWFDAVLVRQAVQLS GVSSIVLTKLDVLNSFDTIKICTGYKYSGKMYDYLPASHSIQGELEPIYEEFPGWKENTQGKRSIETLPINLIKYIEGLE KLIGVPIHLISTSPKREDVIKLKDF
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=425, Percent_Identity=41.1764705882353, Blast_Score=319, Evalue=4e-87, Organism=Homo sapiens, GI34577063, Length=427, Percent_Identity=39.8126463700234, Blast_Score=316, Evalue=2e-86, Organism=Homo sapiens, GI40316944, Length=396, Percent_Identity=39.6464646464646, Blast_Score=277, Evalue=1e-74, Organism=Escherichia coli, GI1790620, Length=429, Percent_Identity=45.6876456876457, Blast_Score=379, Evalue=1e-106, Organism=Caenorhabditis elegans, GI25146555, Length=424, Percent_Identity=41.7452830188679, Blast_Score=319, Evalue=2e-87, Organism=Caenorhabditis elegans, GI25146553, Length=424, Percent_Identity=41.7452830188679, Blast_Score=319, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6324109, Length=428, Percent_Identity=40.4205607476636, Blast_Score=306, Evalue=3e-84, Organism=Drosophila melanogaster, GI21356033, Length=422, Percent_Identity=39.0995260663507, Blast_Score=308, Evalue=3e-84,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 47173; Mature: 47173
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIVIVGLQWGDEGKGKIVDYLSENADVVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVL CCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEEECCHHHHC RPGKISIIGNGVALDSHALISEIESLKVKGVDVNYNNLMVSESCPLILSVHKDKEKLFED CCCEEEEEECCEEECHHHHHHHHHHCEEEEEEECCCCEEEECCCCEEEEECCCHHHHHHH LNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNKRLDTLLNYHNAIRKGLNYQV CCCCCEECCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEE VKKEEILKEIQEISEKILSYKKPVWKILNDLMKEGKKIIFEGAQGAFLDIDHGTYPFVTS ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEC SNTVASQAITGSGLSSNAYIIGVVKAYTTRVGNGPFPTEQKNEVGDSLFTIGKELGTVSN CCCHHHHHEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRRRCGWFDAVLVRQAVQLSGVSSIVLTKLDVLNSFDTIKICTGYKYSGKMYDYLPASHS HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECEEECCCEEECCCCCCC IQGELEPIYEEFPGWKENTQGKRSIETLPINLIKYIEGLEKLIGVPIHLISTSPKREDVI CCCCCCHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE KLKDF EECCC >Mature Secondary Structure MNNIVIVGLQWGDEGKGKIVDYLSENADVVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVL CCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEEECCHHHHC RPGKISIIGNGVALDSHALISEIESLKVKGVDVNYNNLMVSESCPLILSVHKDKEKLFED CCCEEEEEECCEEECHHHHHHHHHHCEEEEEEECCCCEEEECCCCEEEEECCCHHHHHHH LNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDLENADELNKRLDTLLNYHNAIRKGLNYQV CCCCCEECCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEE VKKEEILKEIQEISEKILSYKKPVWKILNDLMKEGKKIIFEGAQGAFLDIDHGTYPFVTS ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEC SNTVASQAITGSGLSSNAYIIGVVKAYTTRVGNGPFPTEQKNEVGDSLFTIGKELGTVSN CCCHHHHHEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRRRCGWFDAVLVRQAVQLSGVSSIVLTKLDVLNSFDTIKICTGYKYSGKMYDYLPASHS HHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECEEECCCEEECCCCCCC IQGELEPIYEEFPGWKENTQGKRSIETLPINLIKYIEGLEKLIGVPIHLISTSPKREDVI CCCCCCHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE KLKDF EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA