| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630187
Identifier: 225630187
GI number: 225630187
Start: 412954
End: 413547
Strand: Reverse
Name: 225630187
Synonym: WRi_003860
Alternate gene names: NA
Gene position: 413547-412954 (Counterclockwise)
Preceding gene: 225630188
Following gene: 225630186
Centisome position: 28.6
GC content: 40.24
Gene sequence:
>594_bases ATGACTTACAATTTTTCTTCGTATCCACGTATGGATTCATGTACTCCTGTGCGCACAGCTTGCATAACTGACCCACGGTA CCATCATAACTTTGACCCACGTTGCCATAACCGCTTTGACTCGCGGCATGATGGACTCGAATTAAATATACAGCTTCCCG AATTCGATTTAAATATACCACCTTGTCCTGCTTGTCCTGATACTGTTTGTCCCCCTGCTCCTGCTTGCCCCCCTGCTCCT GCTTGTCCTGCTTGTCCCCCTTGTCCACAAGTTAAGCCTGAACCTGAATCTAAAACAATCGTTGATTTTTCAAAGCTTGC AATAACGGTCAACCCAATAACTGATGATATTCTTGATATTGAGACCAAAGAGCCAACAGGCTACAAGTTTAAAGAATGTG CAAAAACTATTCAGAATGCTAAAAACAACCTTCAGGTTATAGATGGTAAACTTGTGGGCAGTTGTGAAAACAATTCTGAA TGTGATAAATGTGTAGAAGTAATAAACTCTTCTATATTAGATGCAAAAAGTGCTGAAGCCTTTTTTTCTACCCACAATAT GTCAGTGTTAGAAGGCACTGTTCATATTATATAA
Upstream 100 bases:
>100_bases AGTTAAGTACTGTGTGTATGCTAATTTTAGCCTTAAAATTATTAAATCATTAACTTTTTTATCCTATAATAATCTAATAG TTGCTTTTTAAAGGATTTTT
Downstream 100 bases:
>100_bases AAGTAATACAGTGTGTACATTGTTAGTACACACTTCCATCTTATGGTTAATTTTTTAATAATTTTATTTACTAATGGAGA TATTTTATGCCAACGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTYNFSSYPRMDSCTPVRTACITDPRYHHNFDPRCHNRFDSRHDGLELNIQLPEFDLNIPPCPACPDTVCPPAPACPPAP ACPACPPCPQVKPEPESKTIVDFSKLAITVNPITDDILDIETKEPTGYKFKECAKTIQNAKNNLQVIDGKLVGSCENNSE CDKCVEVINSSILDAKSAEAFFSTHNMSVLEGTVHII
Sequences:
>Translated_197_residues MTYNFSSYPRMDSCTPVRTACITDPRYHHNFDPRCHNRFDSRHDGLELNIQLPEFDLNIPPCPACPDTVCPPAPACPPAP ACPACPPCPQVKPEPESKTIVDFSKLAITVNPITDDILDIETKEPTGYKFKECAKTIQNAKNNLQVIDGKLVGSCENNSE CDKCVEVINSSILDAKSAEAFFSTHNMSVLEGTVHII >Mature_196_residues TYNFSSYPRMDSCTPVRTACITDPRYHHNFDPRCHNRFDSRHDGLELNIQLPEFDLNIPPCPACPDTVCPPAPACPPAPA CPACPPCPQVKPEPESKTIVDFSKLAITVNPITDDILDIETKEPTGYKFKECAKTIQNAKNNLQVIDGKLVGSCENNSEC DKCVEVINSSILDAKSAEAFFSTHNMSVLEGTVHII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21708; Mature: 21577
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYNFSSYPRMDSCTPVRTACITDPRYHHNFDPRCHNRFDSRHDGLELNIQLPEFDLNIP CCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCC PCPACPDTVCPPAPACPPAPACPACPPCPQVKPEPESKTIVDFSKLAITVNPITDDILDI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEC ETKEPTGYKFKECAKTIQNAKNNLQVIDGKLVGSCENNSECDKCVEVINSSILDAKSAEA CCCCCCCCCHHHHHHHHHCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHH FFSTHNMSVLEGTVHII HHHHCCCEEECCEEEEC >Mature Secondary Structure TYNFSSYPRMDSCTPVRTACITDPRYHHNFDPRCHNRFDSRHDGLELNIQLPEFDLNIP CCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCC PCPACPDTVCPPAPACPPAPACPACPPCPQVKPEPESKTIVDFSKLAITVNPITDDILDI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEC ETKEPTGYKFKECAKTIQNAKNNLQVIDGKLVGSCENNSECDKCVEVINSSILDAKSAEA CCCCCCCCCHHHHHHHHHCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHH FFSTHNMSVLEGTVHII HHHHCCCEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA