Click here to switch to the map view.

The map label for this gene is 225630096

Identifier: 225630096

GI number: 225630096

Start: 285476

End: 286531

Strand: Reverse

Name: 225630096

Synonym: WRi_002750

Alternate gene names: NA

Gene position: 286531-285476 (Counterclockwise)

Preceding gene: 225630097

Following gene: 225630092

Centisome position: 19.82

GC content: 39.3

Gene sequence:

>1056_bases
ATGTCACTTACCGATATCGCTCACCGTATCAATGAACTCGCTTCATCATGGGAGCAATTTAAATTAATAAATGATCGCAA
ACTAAAAGAAATTGAAAGCAAAGGGCGTGCTGATTCTGCAACAATTGAGCAGCTATGCAAGGTAAATAATGCCATTGATG
GTTGCAAAGAGCGTTTAGACTTGATCGAAACTGCAGCTCAACGTCCAGAAGTAAATACAGATTTTAGCACAAGCGATAAA
TATTTTTCTGATTATATCCGCAAGGGAATGGAAAGCGGTTTATCGCACAAAACCCTCAGTGGAGATGATAATGATATCGG
GGGGTATCTAGTTACTCCGCATATTGTAAAACGCATAAGCAAGCGCGTAATTGATTCGTCCCCAATGCGACAAATATGCT
CCAGTCAAAGAATCTCTACTGAAACATTGGATTACATTATAGAAGATTTTGACCGCGCCGGTGCAGGTTGGAGCAGTGAA
ACAGTAGATGATGAGGACGGTGGCAATAAGTCTAAGTATGATTTTGCAAAAGATACGGACACGCCCAAAATCCAAAAGAT
TTCTATCACGACTTACGAGTTATATGCTCAACCACAAATATCACAAAAGTTACTCGATGATGCGTTTGTCGATGTTGAGA
GTTGGCTGGTGGAAAAGATTGCCGAGACTTTTAGTAAGGAAGAAAGCGAAGCCTTCATTAAGGGTGAGGGCACTTTTCAA
CCAAAAGGAATTTTAGCTTATGAAAATGGAAACAGTTATAATAAAATAGAGCAAGTTAAAACTGAAAAATTAGATAGTGA
TTCAATAATGATGTTGTATTACTCTCTGGACGAATATTATTCCAAAAATGCGTCATTTTTGATAAACAGGAGTACGTTGA
AGGATATCAGGCTGCTAAAATCTCAAACAGGTCAGTATCTCTGGCAGCCAAGTCTGTCGCTTGAAGCTCCAGATACTTTA
ATGGGAATACCAGTATATCAATCTGCCGATATGCCACCAGCGCCAAACAATCAGCTACCAGTAATTGCCGATGGCAGATT
TCAAACAAGCTTATAA

Upstream 100 bases:

>100_bases
TGTACCATATTGCAATATTCGTACAACTGTGGGAAACATCTATGGATGCCATTCTTATTACCTTATTTCCATTTTTATTT
CATTTTCAAAGGAGGCTATT

Downstream 100 bases:

>100_bases
GATTGTAGATAACAGAGGAATGAGAATATTAAGAGACCCTTATACGAATAAACCTTATGTGAGGTTTTTTGTCACTAAGC
GTGTCGGCGGAGAGGTTGTA

Product: phage major capsid protein, HK97 family

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Bacteriophage Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSLTDIAHRINELASSWEQFKLINDRKLKEIESKGRADSATIEQLCKVNNAIDGCKERLDLIETAAQRPEVNTDFSTSDK
YFSDYIRKGMESGLSHKTLSGDDNDIGGYLVTPHIVKRISKRVIDSSPMRQICSSQRISTETLDYIIEDFDRAGAGWSSE
TVDDEDGGNKSKYDFAKDTDTPKIQKISITTYELYAQPQISQKLLDDAFVDVESWLVEKIAETFSKEESEAFIKGEGTFQ
PKGILAYENGNSYNKIEQVKTEKLDSDSIMMLYYSLDEYYSKNASFLINRSTLKDIRLLKSQTGQYLWQPSLSLEAPDTL
MGIPVYQSADMPPAPNNQLPVIADGRFQTSL

Sequences:

>Translated_351_residues
MSLTDIAHRINELASSWEQFKLINDRKLKEIESKGRADSATIEQLCKVNNAIDGCKERLDLIETAAQRPEVNTDFSTSDK
YFSDYIRKGMESGLSHKTLSGDDNDIGGYLVTPHIVKRISKRVIDSSPMRQICSSQRISTETLDYIIEDFDRAGAGWSSE
TVDDEDGGNKSKYDFAKDTDTPKIQKISITTYELYAQPQISQKLLDDAFVDVESWLVEKIAETFSKEESEAFIKGEGTFQ
PKGILAYENGNSYNKIEQVKTEKLDSDSIMMLYYSLDEYYSKNASFLINRSTLKDIRLLKSQTGQYLWQPSLSLEAPDTL
MGIPVYQSADMPPAPNNQLPVIADGRFQTSL
>Mature_350_residues
SLTDIAHRINELASSWEQFKLINDRKLKEIESKGRADSATIEQLCKVNNAIDGCKERLDLIETAAQRPEVNTDFSTSDKY
FSDYIRKGMESGLSHKTLSGDDNDIGGYLVTPHIVKRISKRVIDSSPMRQICSSQRISTETLDYIIEDFDRAGAGWSSET
VDDEDGGNKSKYDFAKDTDTPKIQKISITTYELYAQPQISQKLLDDAFVDVESWLVEKIAETFSKEESEAFIKGEGTFQP
KGILAYENGNSYNKIEQVKTEKLDSDSIMMLYYSLDEYYSKNASFLINRSTLKDIRLLKSQTGQYLWQPSLSLEAPDTLM
GIPVYQSADMPPAPNNQLPVIADGRFQTSL

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39626; Mature: 39494

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDIAHRINELASSWEQFKLINDRKLKEIESKGRADSATIEQLCKVNNAIDGCKERLD
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIETAAQRPEVNTDFSTSDKYFSDYIRKGMESGLSHKTLSGDDNDIGGYLVTPHIVKRIS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHH
KRVIDSSPMRQICSSQRISTETLDYIIEDFDRAGAGWSSETVDDEDGGNKSKYDFAKDTD
HHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPKIQKISITTYELYAQPQISQKLLDDAFVDVESWLVEKIAETFSKEESEAFIKGEGTFQ
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
PKGILAYENGNSYNKIEQVKTEKLDSDSIMMLYYSLDEYYSKNASFLINRSTLKDIRLLK
CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCEEEEHHHHHHHHHHH
SQTGQYLWQPSLSLEAPDTLMGIPVYQSADMPPAPNNQLPVIADGRFQTSL
HHCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SLTDIAHRINELASSWEQFKLINDRKLKEIESKGRADSATIEQLCKVNNAIDGCKERLD
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIETAAQRPEVNTDFSTSDKYFSDYIRKGMESGLSHKTLSGDDNDIGGYLVTPHIVKRIS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHH
KRVIDSSPMRQICSSQRISTETLDYIIEDFDRAGAGWSSETVDDEDGGNKSKYDFAKDTD
HHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPKIQKISITTYELYAQPQISQKLLDDAFVDVESWLVEKIAETFSKEESEAFIKGEGTFQ
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
PKGILAYENGNSYNKIEQVKTEKLDSDSIMMLYYSLDEYYSKNASFLINRSTLKDIRLLK
CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCEEEEHHHHHHHHHHH
SQTGQYLWQPSLSLEAPDTLMGIPVYQSADMPPAPNNQLPVIADGRFQTSL
HHCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA