| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630035
Identifier: 225630035
GI number: 225630035
Start: 203545
End: 204690
Strand: Reverse
Name: 225630035
Synonym: WRi_002030
Alternate gene names: NA
Gene position: 204690-203545 (Counterclockwise)
Preceding gene: 225630036
Following gene: 225630034
Centisome position: 14.16
GC content: 33.86
Gene sequence:
>1146_bases TTGGTATATAAGAACGTGCTACAACTATTAATCTTACTCACGGTCATCACTTCAGCTGCATTCTTTGGTCATTTAGTTCC AATGGAAGTAAAAACCTTCTTGTACTCAACGAGCCTTAGTATAAAAGAGGTTTTGCTATTTATAATGCCTTTTATTATTT TTGCGTTAATCTTTAGCAGTGTTAACAATCTTAAGCAGTCAGCTATAAAGTTCATATTGTTACTTATTATAATGATCTTC TTATCGAATCTGGCTTCAAGTTTAATAGCTTATTCTGTTGGGCATTTTATCATACAAAACACTTATTCAATACAAGATAT AACGTATGAAGAAACAATTGTTCCCTTATGGTCGTTTAGACTGCCTGCATTGCTTTCTAATTTTTATGCCCTTGCTTGTG GATTTGTGTCCAGCATAGTAGTGTCCACACTGCTACCCAAAAAAAGCAGAGAGCTTTCGAACAAAATGTTAGATTTAACT CTCTTTATTTTGAAGACGTTTTTGACGCCGATTATTCCAATATTTGTACTTGGGCTTGCTTTAAAAATGCAGCATGATCA AGTTTTATCTATAATATTTAAGGATTACTCAATAATTTTCATTATTATAGCATCTGCAACCTACCTTTATGTTTTCCTCT TATATGGAGCAGCAAATTCATTCAAGATCACAAGCTGGATAGCTAGTATAGGCAATATGATACCGGCATTTATTACTGCA ATGAGCACAATGTCTAGTAATGCAACTATGCCGCTTACTCTTGAAGGAAGCAAAAAAAATGTAAAGCAACCTGACATAGC ATCGTCTGTTGTGCCAATAACTGCTAGCTTTCATTTAGTAGGTGATTGCTTTTTTATTATAATATTATCAATGATAATTG CCTCCGGTTATTCATTGTGCACAACAGACTATGTAACTTTCCTTCTCTATTTTTTGTTATTTAAGTTTGCTATCGTGGCA GTTCCGGCAGGAGGAATTATGGTAATGCTACCTATTCTTGAGAAATACCTCAAATTTTCTCCAGAAATGCTTTCGTTAAT CACAGCACTGTATATAGTGTTTGATCCAATAATCACTTCAGCAAACGTTATGGGTAATGGTGCCTTTGCTATAATGTTTA CAAAACTCTATGATAAGCTTAAGTAA
Upstream 100 bases:
>100_bases TCTTTTTTGTCATTCCACTTTCATTACACCATTTGCTGTGCAGTTTAGACAGTTTTGCTTTACTTAACAACTAACTTACC ATATATATGTCCATAGGACA
Downstream 100 bases:
>100_bases TGTCTATTTTAGCGATTGATACTGTAGGTATTGGTAGTTCAATAGCAATAGTTGATTATGATGGTAACTGTTTTGTAGAG CACAATTCCGCCAGCAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: SodiumDicarboxylate Symporter Family Protein; Serine/Threonine Sodium Symporter; Na+/H+-Dicarboxylate Symporter; Serine/Threonine Transporter; Na+/H+ Dicarboxylate Symporter; Proton/Sodium-Glutamate Symport Protein; Na(+)/H(+)-Dicarboxylate Symporter; Glutamate/Aspartate Transporter; Glutamate/ Aspartate Transporter; Na+/H+ Dicarboxylate Symporte; DAACS Family Transporter; Na+H+-Dicarboxylate Symporter; Transmembrane Symporter; Dicarboxylate/Amino Acid Transporter; Symporter; Sodium-Glutamate Symporter
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSSVNNLKQSAIKFILLLIIMIF LSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFRLPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLT LFILKTFLTPIIPIFVLGLALKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLCTTDYVTFLLYFLLFKFAIVA VPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITSANVMGNGAFAIMFTKLYDKLK
Sequences:
>Translated_381_residues MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSSVNNLKQSAIKFILLLIIMIF LSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFRLPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLT LFILKTFLTPIIPIFVLGLALKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLCTTDYVTFLLYFLLFKFAIVA VPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITSANVMGNGAFAIMFTKLYDKLK >Mature_381_residues MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSSVNNLKQSAIKFILLLIIMIF LSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFRLPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLT LFILKTFLTPIIPIFVLGLALKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLCTTDYVTFLLYFLLFKFAIVA VPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITSANVMGNGAFAIMFTKLYDKLK
Specific function: Unknown
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42406; Mature: 42406
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VNNLKQSAIKFILLLIIMIFLSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLTLFILKTFLTPIIPIFVLGLA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLC HHHHCCCCCEEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TTDYVTFLLYFLLFKFAIVAVPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC ANVMGNGAFAIMFTKLYDKLK CHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VNNLKQSAIKFILLLIIMIFLSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLTLFILKTFLTPIIPIFVLGLA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLC HHHHCCCCCEEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TTDYVTFLLYFLLFKFAIVAVPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC ANVMGNGAFAIMFTKLYDKLK CHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA