Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630035

Identifier: 225630035

GI number: 225630035

Start: 203545

End: 204690

Strand: Reverse

Name: 225630035

Synonym: WRi_002030

Alternate gene names: NA

Gene position: 204690-203545 (Counterclockwise)

Preceding gene: 225630036

Following gene: 225630034

Centisome position: 14.16

GC content: 33.86

Gene sequence:

>1146_bases
TTGGTATATAAGAACGTGCTACAACTATTAATCTTACTCACGGTCATCACTTCAGCTGCATTCTTTGGTCATTTAGTTCC
AATGGAAGTAAAAACCTTCTTGTACTCAACGAGCCTTAGTATAAAAGAGGTTTTGCTATTTATAATGCCTTTTATTATTT
TTGCGTTAATCTTTAGCAGTGTTAACAATCTTAAGCAGTCAGCTATAAAGTTCATATTGTTACTTATTATAATGATCTTC
TTATCGAATCTGGCTTCAAGTTTAATAGCTTATTCTGTTGGGCATTTTATCATACAAAACACTTATTCAATACAAGATAT
AACGTATGAAGAAACAATTGTTCCCTTATGGTCGTTTAGACTGCCTGCATTGCTTTCTAATTTTTATGCCCTTGCTTGTG
GATTTGTGTCCAGCATAGTAGTGTCCACACTGCTACCCAAAAAAAGCAGAGAGCTTTCGAACAAAATGTTAGATTTAACT
CTCTTTATTTTGAAGACGTTTTTGACGCCGATTATTCCAATATTTGTACTTGGGCTTGCTTTAAAAATGCAGCATGATCA
AGTTTTATCTATAATATTTAAGGATTACTCAATAATTTTCATTATTATAGCATCTGCAACCTACCTTTATGTTTTCCTCT
TATATGGAGCAGCAAATTCATTCAAGATCACAAGCTGGATAGCTAGTATAGGCAATATGATACCGGCATTTATTACTGCA
ATGAGCACAATGTCTAGTAATGCAACTATGCCGCTTACTCTTGAAGGAAGCAAAAAAAATGTAAAGCAACCTGACATAGC
ATCGTCTGTTGTGCCAATAACTGCTAGCTTTCATTTAGTAGGTGATTGCTTTTTTATTATAATATTATCAATGATAATTG
CCTCCGGTTATTCATTGTGCACAACAGACTATGTAACTTTCCTTCTCTATTTTTTGTTATTTAAGTTTGCTATCGTGGCA
GTTCCGGCAGGAGGAATTATGGTAATGCTACCTATTCTTGAGAAATACCTCAAATTTTCTCCAGAAATGCTTTCGTTAAT
CACAGCACTGTATATAGTGTTTGATCCAATAATCACTTCAGCAAACGTTATGGGTAATGGTGCCTTTGCTATAATGTTTA
CAAAACTCTATGATAAGCTTAAGTAA

Upstream 100 bases:

>100_bases
TCTTTTTTGTCATTCCACTTTCATTACACCATTTGCTGTGCAGTTTAGACAGTTTTGCTTTACTTAACAACTAACTTACC
ATATATATGTCCATAGGACA

Downstream 100 bases:

>100_bases
TGTCTATTTTAGCGATTGATACTGTAGGTATTGGTAGTTCAATAGCAATAGTTGATTATGATGGTAACTGTTTTGTAGAG
CACAATTCCGCCAGCAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: SodiumDicarboxylate Symporter Family Protein; Serine/Threonine Sodium Symporter; Na+/H+-Dicarboxylate Symporter; Serine/Threonine Transporter; Na+/H+ Dicarboxylate Symporter; Proton/Sodium-Glutamate Symport Protein; Na(+)/H(+)-Dicarboxylate Symporter; Glutamate/Aspartate Transporter; Glutamate/ Aspartate Transporter; Na+/H+ Dicarboxylate Symporte; DAACS Family Transporter; Na+H+-Dicarboxylate Symporter; Transmembrane Symporter; Dicarboxylate/Amino Acid Transporter; Symporter; Sodium-Glutamate Symporter

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSSVNNLKQSAIKFILLLIIMIF
LSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFRLPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLT
LFILKTFLTPIIPIFVLGLALKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA
MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLCTTDYVTFLLYFLLFKFAIVA
VPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITSANVMGNGAFAIMFTKLYDKLK

Sequences:

>Translated_381_residues
MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSSVNNLKQSAIKFILLLIIMIF
LSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFRLPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLT
LFILKTFLTPIIPIFVLGLALKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA
MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLCTTDYVTFLLYFLLFKFAIVA
VPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITSANVMGNGAFAIMFTKLYDKLK
>Mature_381_residues
MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSSVNNLKQSAIKFILLLIIMIF
LSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFRLPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLT
LFILKTFLTPIIPIFVLGLALKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA
MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLCTTDYVTFLLYFLLFKFAIVA
VPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITSANVMGNGAFAIMFTKLYDKLK

Specific function: Unknown

COG id: COG1301

COG function: function code C; Na+/H+-dicarboxylate symporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42406; Mature: 42406

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VNNLKQSAIKFILLLIIMIFLSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLTLFILKTFLTPIIPIFVLGLA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLC
HHHHCCCCCEEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TTDYVTFLLYFLLFKFAIVAVPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
ANVMGNGAFAIMFTKLYDKLK
CHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVYKNVLQLLILLTVITSAAFFGHLVPMEVKTFLYSTSLSIKEVLLFIMPFIIFALIFSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VNNLKQSAIKFILLLIIMIFLSNLASSLIAYSVGHFIIQNTYSIQDITYEETIVPLWSFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LPALLSNFYALACGFVSSIVVSTLLPKKSRELSNKMLDLTLFILKTFLTPIIPIFVLGLA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKMQHDQVLSIIFKDYSIIFIIIASATYLYVFLLYGAANSFKITSWIASIGNMIPAFITA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MSTMSSNATMPLTLEGSKKNVKQPDIASSVVPITASFHLVGDCFFIIILSMIIASGYSLC
HHHHCCCCCEEEEECCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TTDYVTFLLYFLLFKFAIVAVPAGGIMVMLPILEKYLKFSPEMLSLITALYIVFDPIITS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
ANVMGNGAFAIMFTKLYDKLK
CHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA