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The map label for this gene is 225630022

Identifier: 225630022

GI number: 225630022

Start: 187117

End: 188193

Strand: Reverse

Name: 225630022

Synonym: WRi_001840

Alternate gene names: NA

Gene position: 188193-187117 (Counterclockwise)

Preceding gene: 225630023

Following gene: 225630021

Centisome position: 13.02

GC content: 31.29

Gene sequence:

>1077_bases
ATGAAAAGTAATCTCTCTTTTATAAAAAACGTTGCTTTAAATTGTATGTCTAAGCTCATTGGCGTATTAAATATTAAGAA
AGTAAAACACTTCATTGTGAATAAATATAATACTCTTCATAAAGAAATGACAGTGCTTCTTAAAAAATCTAAGAACCTGT
TAAACACCAACATTGAAATCGGTTTATATCACTTTTATAAAGGTAGCATATCAGATGCAAAGTTACGATTTTGGTTAATT
AGCATATTTTACCCCCATTTACCTATAGTCTGGTATAACATCGGAAGGTGTCATTTTGCGGTAGGGAATACTAACAAAGC
TTATAATTATTTAACAAGGGCACTAAAATTAGATAATGACCACGAAGAGGCGTCTTACTATATAAAAAAAATGACAAACT
CAGCGCCTATTACAGAATTGCCAAAAAACCTCATAAGACAATATTTTGATTACACAGGTGAATATTTTGTTGAGCATTGG
TTGATTGCCAAACAATATAGAGGGCATGAACTTGTACACATGATAATTACAAAAATCTTCAACAACTCCACTTCTGAGCT
CAATATACTCGACCTTGGTTGTGGAACTGGAATATGTGGTCATTTCTTGAAAATAAATAGTATTGGAAACCATATAACAG
GAATTGACATTTCAAGTAGAATGCTAAATATCGCAAGAGGATGCTTTATAAAAGGTAAGCCTGTTTACAATGAATTAATA
CATATGGAAATGAAAGAGTTTCTTAAACAAGAGAAAAACCAGCAGTATGATGTAATTATCTTTGCTGAAGTGCTACATTA
TCTACATGACTTTCAAGAAGAATTGGAATTAGCAAAAAGATCTACGAGCAAAAAAGGGGTTATTGTATGTTTAATAAGAA
GAAAGGAAGGTGAAGGTATTGACTTTGTAAATAAAGGAGACTATTTTCGTCACTCAGAAAGTTATGTTCAACATGTTGCA
AAAGAAATAAATATGCAAATAAGTTATATGAGTTACTGTAAAATATATGGCAGTCAGGTTGACGGTATCTTGTTTGCATT
ACAGCATCAACAAGAAAATCCGAAAAACCTAACTTAA

Upstream 100 bases:

>100_bases
ATATACAGTAAAAATTAATAAAAAAGATATTTTGTAAGATAAAATGTGTTAAAATCAATTGCCTAAAAATGATAATAAAC
ATTCGGAGTATTTCTAACGT

Downstream 100 bases:

>100_bases
AAATCGCTCAAAATGACTTTTAAGTATCTATATATAATAAAAGAATAAAAGGAACTTTATGAATAACATTACCATTAATT
ACGCAAAGGACAGCAAATTA

Product: TPR domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKSNLSFIKNVALNCMSKLIGVLNIKKVKHFIVNKYNTLHKEMTVLLKKSKNLLNTNIEIGLYHFYKGSISDAKLRFWLI
SIFYPHLPIVWYNIGRCHFAVGNTNKAYNYLTRALKLDNDHEEASYYIKKMTNSAPITELPKNLIRQYFDYTGEYFVEHW
LIAKQYRGHELVHMIITKIFNNSTSELNILDLGCGTGICGHFLKINSIGNHITGIDISSRMLNIARGCFIKGKPVYNELI
HMEMKEFLKQEKNQQYDVIIFAEVLHYLHDFQEELELAKRSTSKKGVIVCLIRRKEGEGIDFVNKGDYFRHSESYVQHVA
KEINMQISYMSYCKIYGSQVDGILFALQHQQENPKNLT

Sequences:

>Translated_358_residues
MKSNLSFIKNVALNCMSKLIGVLNIKKVKHFIVNKYNTLHKEMTVLLKKSKNLLNTNIEIGLYHFYKGSISDAKLRFWLI
SIFYPHLPIVWYNIGRCHFAVGNTNKAYNYLTRALKLDNDHEEASYYIKKMTNSAPITELPKNLIRQYFDYTGEYFVEHW
LIAKQYRGHELVHMIITKIFNNSTSELNILDLGCGTGICGHFLKINSIGNHITGIDISSRMLNIARGCFIKGKPVYNELI
HMEMKEFLKQEKNQQYDVIIFAEVLHYLHDFQEELELAKRSTSKKGVIVCLIRRKEGEGIDFVNKGDYFRHSESYVQHVA
KEINMQISYMSYCKIYGSQVDGILFALQHQQENPKNLT
>Mature_358_residues
MKSNLSFIKNVALNCMSKLIGVLNIKKVKHFIVNKYNTLHKEMTVLLKKSKNLLNTNIEIGLYHFYKGSISDAKLRFWLI
SIFYPHLPIVWYNIGRCHFAVGNTNKAYNYLTRALKLDNDHEEASYYIKKMTNSAPITELPKNLIRQYFDYTGEYFVEHW
LIAKQYRGHELVHMIITKIFNNSTSELNILDLGCGTGICGHFLKINSIGNHITGIDISSRMLNIARGCFIKGKPVYNELI
HMEMKEFLKQEKNQQYDVIIFAEVLHYLHDFQEELELAKRSTSKKGVIVCLIRRKEGEGIDFVNKGDYFRHSESYVQHVA
KEINMQISYMSYCKIYGSQVDGILFALQHQQENPKNLT

Specific function: Unknown

COG id: COG4976

COG function: function code R; Predicted methyltransferase (contains TPR repeat)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41667; Mature: 41667

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNLSFIKNVALNCMSKLIGVLNIKKVKHFIVNKYNTLHKEMTVLLKKSKNLLNTNIEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE
GLYHFYKGSISDAKLRFWLISIFYPHLPIVWYNIGRCHFAVGNTNKAYNYLTRALKLDND
EEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHCCCC
HEEASYYIKKMTNSAPITELPKNLIRQYFDYTGEYFVEHWLIAKQYRGHELVHMIITKIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NNSTSELNILDLGCGTGICGHFLKINSIGNHITGIDISSRMLNIARGCFIKGKPVYNELI
CCCCCEEEEEEECCCCCHHHHHEEECCCCCEEECCCHHHHHHHHHHCCEECCCHHHHHHH
HMEMKEFLKQEKNQQYDVIIFAEVLHYLHDFQEELELAKRSTSKKGVIVCLIRRKEGEGI
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
DFVNKGDYFRHSESYVQHVAKEINMQISYMSYCKIYGSQVDGILFALQHQQENPKNLT
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCC
>Mature Secondary Structure
MKSNLSFIKNVALNCMSKLIGVLNIKKVKHFIVNKYNTLHKEMTVLLKKSKNLLNTNIEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE
GLYHFYKGSISDAKLRFWLISIFYPHLPIVWYNIGRCHFAVGNTNKAYNYLTRALKLDND
EEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHCCCC
HEEASYYIKKMTNSAPITELPKNLIRQYFDYTGEYFVEHWLIAKQYRGHELVHMIITKIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NNSTSELNILDLGCGTGICGHFLKINSIGNHITGIDISSRMLNIARGCFIKGKPVYNELI
CCCCCEEEEEEECCCCCHHHHHEEECCCCCEEECCCHHHHHHHHHHCCEECCCHHHHHHH
HMEMKEFLKQEKNQQYDVIIFAEVLHYLHDFQEELELAKRSTSKKGVIVCLIRRKEGEGI
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
DFVNKGDYFRHSESYVQHVAKEINMQISYMSYCKIYGSQVDGILFALQHQQENPKNLT
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]