Click here to switch to the map view.

The map label for this gene is dprA [H]

Identifier: 225630004

GI number: 225630004

Start: 158965

End: 160053

Strand: Direct

Name: dprA [H]

Synonym: WRi_001580

Alternate gene names: 225630004

Gene position: 158965-160053 (Clockwise)

Preceding gene: 225629994

Following gene: 225630006

Centisome position: 10.99

GC content: 35.9

Gene sequence:

>1089_bases
ATGAAGATAAATAAATTGAACAACAAAGAATTAGAAGTATGGTTAAGCTTGGCTAGAACTATAGGACCAATAAAGTTTTT
TAGTATACTAAAAACACACGGATCGCTAGATGAGGTGCTAAAATATCTCAATAGGGTGGCTAATAATAAGGTGTATGGCA
TTCAAGATGCACGAGAAGAAATCAATAATGCAGAAAGAATTGGAGCTAAAATTATACCCGCATGTGACCCAGATTACCCT
GATCTTTTAAGAAATATCTCTAGTTGTCCTCCTGTAATAACTGCGCTTGGTGATATATCATTATTAAGCCGTGAGATAAT
TGCAATAATCGGTGGGCGTAACTCTTCAATGAATGGAAGAAATTTTGCCAATAAGTTGGCACTTGATTTAAGTGAAGCTG
GTTTTGTTATCGTTTCTGGACTTGCAAAAGGAATTGATACTGCAGCAAACAGTGTAATATACAAAAATCATTCCACTATT
GCTGTTACAGCAAGCGGAATTGATGTGGTGTATCCAAAAGAGAATTTTGATCTATACAAAAAAATCACTGGGAACGGTGG
GTTAGTAATTACTGAGCTTCCATTTGCTACTAAACCAAAACCTCAATATTTCCCTCAAAGGAATCGAATTATATCTGGTC
TATCGCTGGGTGTTGCAGTGATTGAAGCATCGAAACGTTCTGGCTCTCTAATAACAGCAGATTTTGCTTTAAATCAAGGG
AGAGAGGTGTTTGCAGTTTCTGGTTTCCCTTTAGATTCACGCTGTAGTGGTAGTAATTATTTAATTAAAAACGGTGCTAA
GCTTATTGAATCTGCTGATGACATAATAGAGAGTGTTAGGTTTAGCCTACCTCCGCAGCAAAAAAACCTATTTGATGTTG
AGCACTATGCTGTTAACCAAAAACAAGAAAAATTACAACAGGCAAAATCTGTTATAGTTGATCATATTAACTCTGTACCT
GTTGATATAGATGAACTTATATTAGCAAGCGGACTTTCTACCAACATAGCTCTAATGGCTCTTTTAGAACTAGAGTTGGA
AAACAAAATAGAGCGTTCACCGGGGAATAAAATATCGTTAATTTTCTAG

Upstream 100 bases:

>100_bases
TTTACATTTTATGCATTTATCTGTAACAAAATGCGTCATAAAACACTGTATATTTGCATTATCTTGGGTACACTAAATTG
ATAAGAAATTCAAGCCTTTT

Downstream 100 bases:

>100_bases
ATTACTTTAGCTATACTAGATGTTCGTACAGATATAGCTAAAGTGGCTTAGGTTTACCTACAATTTGAAAAACAACAAAT
TCGTCATTCCGCTACTCGTT

Product: DNA processing chain A

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKINKLNNKELEVWLSLARTIGPIKFFSILKTHGSLDEVLKYLNRVANNKVYGIQDAREEINNAERIGAKIIPACDPDYP
DLLRNISSCPPVITALGDISLLSREIIAIIGGRNSSMNGRNFANKLALDLSEAGFVIVSGLAKGIDTAANSVIYKNHSTI
AVTASGIDVVYPKENFDLYKKITGNGGLVITELPFATKPKPQYFPQRNRIISGLSLGVAVIEASKRSGSLITADFALNQG
REVFAVSGFPLDSRCSGSNYLIKNGAKLIESADDIIESVRFSLPPQQKNLFDVEHYAVNQKQEKLQQAKSVIVDHINSVP
VDIDELILASGLSTNIALMALLELELENKIERSPGNKISLIF

Sequences:

>Translated_362_residues
MKINKLNNKELEVWLSLARTIGPIKFFSILKTHGSLDEVLKYLNRVANNKVYGIQDAREEINNAERIGAKIIPACDPDYP
DLLRNISSCPPVITALGDISLLSREIIAIIGGRNSSMNGRNFANKLALDLSEAGFVIVSGLAKGIDTAANSVIYKNHSTI
AVTASGIDVVYPKENFDLYKKITGNGGLVITELPFATKPKPQYFPQRNRIISGLSLGVAVIEASKRSGSLITADFALNQG
REVFAVSGFPLDSRCSGSNYLIKNGAKLIESADDIIESVRFSLPPQQKNLFDVEHYAVNQKQEKLQQAKSVIVDHINSVP
VDIDELILASGLSTNIALMALLELELENKIERSPGNKISLIF
>Mature_362_residues
MKINKLNNKELEVWLSLARTIGPIKFFSILKTHGSLDEVLKYLNRVANNKVYGIQDAREEINNAERIGAKIIPACDPDYP
DLLRNISSCPPVITALGDISLLSREIIAIIGGRNSSMNGRNFANKLALDLSEAGFVIVSGLAKGIDTAANSVIYKNHSTI
AVTASGIDVVYPKENFDLYKKITGNGGLVITELPFATKPKPQYFPQRNRIISGLSLGVAVIEASKRSGSLITADFALNQG
REVFAVSGFPLDSRCSGSNYLIKNGAKLIESADDIIESVRFSLPPQQKNLFDVEHYAVNQKQEKLQQAKSVIVDHINSVP
VDIDELILASGLSTNIALMALLELELENKIERSPGNKISLIF

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=300, Percent_Identity=34, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39520; Mature: 39520

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKLNNKELEVWLSLARTIGPIKFFSILKTHGSLDEVLKYLNRVANNKVYGIQDAREE
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECHHHHHH
INNAERIGAKIIPACDPDYPDLLRNISSCPPVITALGDISLLSREIIAIIGGRNSSMNGR
HCHHHHCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
NFANKLALDLSEAGFVIVSGLAKGIDTAANSVIYKNHSTIAVTASGIDVVYPKENFDLYK
HHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCEEEECCCEEEEEECCEEEEECCCCCCEEE
KITGNGGLVITELPFATKPKPQYFPQRNRIISGLSLGVAVIEASKRSGSLITADFALNQG
EECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEHEEEECCCCCCEEEEEEECCCC
REVFAVSGFPLDSRCSGSNYLIKNGAKLIESADDIIESVRFSLPPQQKNLFDVEHYAVNQ
CEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCH
KQEKLQQAKSVIVDHINSVPVDIDELILASGLSTNIALMALLELELENKIERSPGNKISL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
IF
EC
>Mature Secondary Structure
MKINKLNNKELEVWLSLARTIGPIKFFSILKTHGSLDEVLKYLNRVANNKVYGIQDAREE
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECHHHHHH
INNAERIGAKIIPACDPDYPDLLRNISSCPPVITALGDISLLSREIIAIIGGRNSSMNGR
HCHHHHCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
NFANKLALDLSEAGFVIVSGLAKGIDTAANSVIYKNHSTIAVTASGIDVVYPKENFDLYK
HHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCEEEECCCEEEEEECCEEEEECCCCCCEEE
KITGNGGLVITELPFATKPKPQYFPQRNRIISGLSLGVAVIEASKRSGSLITADFALNQG
EECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEHEEEECCCCCCEEEEEEECCCC
REVFAVSGFPLDSRCSGSNYLIKNGAKLIESADDIIESVRFSLPPQQKNLFDVEHYAVNQ
CEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCH
KQEKLQQAKSVIVDHINSVPVDIDELILASGLSTNIALMALLELELENKIERSPGNKISL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
IF
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]