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The map label for this gene is 225629956

Identifier: 225629956

GI number: 225629956

Start: 101850

End: 102506

Strand: Direct

Name: 225629956

Synonym: WRi_001020

Alternate gene names: NA

Gene position: 101850-102506 (Clockwise)

Preceding gene: 225629955

Following gene: 225629957

Centisome position: 7.04

GC content: 36.53

Gene sequence:

>657_bases
GTGCAAAAAAGTGAGAAACTAACTAAAGATAAAAAACTAGCTTCTGATATTCTAAAAGAGGTTGCAGATACCAATAACAA
TGATAGCAATAAAGTAACTTTGTTTGACATTAAAACAGCTTTGCATGAGCGCGGTTTTGGTATTTTAATAATCATCTTCT
CCTTGCCGCTATCGGTGCCTATACCGGTTCCACCTGGTTATACAACTATTCTTTCTATACCTTTAATCTTATTCTCACTG
CAGCTTCTATTTGGATTTGATTCTCCTTGGATGCCCAGTTGGCTAGAAAGAAGATCTTTTCAGCGTTCAACACTAGCTCT
TGTGGTAGAGAAAACTTCCCCTGTATTAGAAAAAATAGAAAAATTCATGAAGCCAAGACTGTCTTTCATTTTCTATGGGC
CTGGTGAGAAGATTCTGGCTTTTATGATGTTGCTTTGTGCAATAATAATAGCTCTTCCATTACCTTTTACTCACTTCCTT
CCTGCAATTGGCACAACTCTTATTTCACTTGGCATTATGAGTAAAGACGGGTTTCTATCCATATTGGGAGTTTTAGTGTC
ATTGTGTGCGTTGTTGCTTACTCTTATTGTAATACTCAAAGGACCACAACTTATAACCGGAGCACTTTCTCTTCTTAAAA
GCTTTACAACACTTTAA

Upstream 100 bases:

>100_bases
GAATGAAAGAGATGAAGTGTTGGTATGAAATAAATAACAAATATTGAAATACAGCAACAACTATGTTAGCTTAAGAGGAA
TATTTTATTAAAGGATAATT

Downstream 100 bases:

>100_bases
CAAAAGAACGAAGTACTAGCGCGAAATGAATAATGCATATTGAAATAAAACAATAATTGTGTTAAGAATTATTTTTATCA
AGGGTTTTTCGTGTCAAAAA

Product: exopolysaccharide synthesis protein ExoD-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQKSEKLTKDKKLASDILKEVADTNNNDSNKVTLFDIKTALHERGFGILIIIFSLPLSVPIPVPPGYTTILSIPLILFSL
QLLFGFDSPWMPSWLERRSFQRSTLALVVEKTSPVLEKIEKFMKPRLSFIFYGPGEKILAFMMLLCAIIIALPLPFTHFL
PAIGTTLISLGIMSKDGFLSILGVLVSLCALLLTLIVILKGPQLITGALSLLKSFTTL

Sequences:

>Translated_218_residues
MQKSEKLTKDKKLASDILKEVADTNNNDSNKVTLFDIKTALHERGFGILIIIFSLPLSVPIPVPPGYTTILSIPLILFSL
QLLFGFDSPWMPSWLERRSFQRSTLALVVEKTSPVLEKIEKFMKPRLSFIFYGPGEKILAFMMLLCAIIIALPLPFTHFL
PAIGTTLISLGIMSKDGFLSILGVLVSLCALLLTLIVILKGPQLITGALSLLKSFTTL
>Mature_218_residues
MQKSEKLTKDKKLASDILKEVADTNNNDSNKVTLFDIKTALHERGFGILIIIFSLPLSVPIPVPPGYTTILSIPLILFSL
QLLFGFDSPWMPSWLERRSFQRSTLALVVEKTSPVLEKIEKFMKPRLSFIFYGPGEKILAFMMLLCAIIIALPLPFTHFL
PAIGTTLISLGIMSKDGFLSILGVLVSLCALLLTLIVILKGPQLITGALSLLKSFTTL

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 24088; Mature: 24088

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSEKLTKDKKLASDILKEVADTNNNDSNKVTLFDIKTALHERGFGILIIIFSLPLSVP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCEEEHEECCCCCCC
IPVPPGYTTILSIPLILFSLQLLFGFDSPWMPSWLERRSFQRSTLALVVEKTSPVLEKIE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KFMKPRLSFIFYGPGEKILAFMMLLCAIIIALPLPFTHFLPAIGTTLISLGIMSKDGFLS
HHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
ILGVLVSLCALLLTLIVILKGPQLITGALSLLKSFTTL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKSEKLTKDKKLASDILKEVADTNNNDSNKVTLFDIKTALHERGFGILIIIFSLPLSVP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCEEEHEECCCCCCC
IPVPPGYTTILSIPLILFSLQLLFGFDSPWMPSWLERRSFQRSTLALVVEKTSPVLEKIE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KFMKPRLSFIFYGPGEKILAFMMLLCAIIIALPLPFTHFLPAIGTTLISLGIMSKDGFLS
HHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
ILGVLVSLCALLLTLIVILKGPQLITGALSLLKSFTTL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]