| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225629911
Identifier: 225629911
GI number: 225629911
Start: 52263
End: 53450
Strand: Direct
Name: 225629911
Synonym: WRi_000440
Alternate gene names: NA
Gene position: 52263-53450 (Clockwise)
Preceding gene: 225629910
Following gene: 225629912
Centisome position: 3.61
GC content: 35.44
Gene sequence:
>1188_bases ATGGAAAGCAGAGCTAAGGCTTGGTTCATTTGGCTGATTAGTAACTTGGTTGTTATATTCAGCAACATGCAGATAATTTA TACCTTTATAAGTGTAAATCTCGAAAAGGAACTTGGACTTACAATCGCGCAAGTTGCACTGGCTAATTCAGTATATACTT GGACTTTCGCCATCTTACAATTTTTTAGTGGAGCAACGTTTAATGTTTTTTCCAGTAAAAAAATTTATTTTTTCTCGTTA TCAACTATGATCTTGGGGTTTTTTGTCCTTATTAATAGTGACAATTTCTCCCATTTGATTTTGTCTCAAGTGTTGATTGC AACTGGAGCATCATTTGGTTTTATTGGTGCTGCTCACACAAGTAGCATATGTTTTTCCGCTGCCCAATTTGGACTAATGT TTTCACTAGTGCAGACAATTTCAAGCCTTTCTGCTTTGGTAATTCAAATACTGTTCTCTAACTTGCTTGCCGAAGATGCA TATTGGAAAAATCTGATTGTATGCATAATACTATTTGGTGTGTTGATATTTGTACTTACGCTTTTTTGTCCAAACACACT TCCAGAAAGCAGCTCAGAAAAGCGCACAATAAAAAGCTCTATGAAGACAGTAATGTGCTCTATATTAACAGTGCTAAAAT TAAGAGATATCTGGATAACTTCAGTGGTGGGTGCTATTACTTTTGGAACATTTTTAGCACTTAATACCTTGTGGGCTCCA AGGTTACTGGGCAACTCAGAACTCAATGCAATGGAGTCAGGTATAGCAACTGCAATACTATGGCTTGGTCTTGCAGTTGG TGCTCCAATTGCAGATCGAATCTCAAACTTATTTAAAAATAGGAAACATGTAATTTCTGCTTTTGCTTTATTGCAAGGCG TCTCAATTATTATTTTACTATACAGCCATTTAACAGTCCACGTTGTGTACTTTTGTATGTTAATGTTCGGGTTTTTTGCG GGAGGACATATGCTTAATTTTACTGTCGGCAGCGAGATTGTGAAACGAAAATACATCAGCACATCATCATCCATTATCAA TGGATTTATGTTTATTGGCAGTGGAGTTATAGTGTCAATGTTAGCACTTTTTACAGATCATAAAATGGCACTTTTTGCAA TATTTGCGATATTGATAGTTGCCGGTATTTTAAATTATGCAACAAAAGAGACATACTCTAAAAAATAA
Upstream 100 bases:
>100_bases AACCGTTTTTTGGGTTAGCTATAACAGTAGTCAGGAAACAATAGCTTAAAAAGAGACTTAGTGTTAAATTTCTAATAGAT TACTTATAAAAATAAATCTT
Downstream 100 bases:
>100_bases AGTAGCTGAATCTCGAGTCGATTGCTATATTATATTTACGTATTGTAATATTTATCAATAATGGATCACGTTACAACAAA AGACACAACAGTAACTAAGG
Product: major facilitator family transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Protein; Facilitator Family Transporter Transporter; Facilitator Transporter; Facilitator Superfamily Sugar Transporter; Sugar Phosphate Permease; Sugar Transporter; Transporter MFS Superfamily
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MESRAKAWFIWLISNLVVIFSNMQIIYTFISVNLEKELGLTIAQVALANSVYTWTFAILQFFSGATFNVFSSKKIYFFSL STMILGFFVLINSDNFSHLILSQVLIATGASFGFIGAAHTSSICFSAAQFGLMFSLVQTISSLSALVIQILFSNLLAEDA YWKNLIVCIILFGVLIFVLTLFCPNTLPESSSEKRTIKSSMKTVMCSILTVLKLRDIWITSVVGAITFGTFLALNTLWAP RLLGNSELNAMESGIATAILWLGLAVGAPIADRISNLFKNRKHVISAFALLQGVSIIILLYSHLTVHVVYFCMLMFGFFA GGHMLNFTVGSEIVKRKYISTSSSIINGFMFIGSGVIVSMLALFTDHKMALFAIFAILIVAGILNYATKETYSKK
Sequences:
>Translated_395_residues MESRAKAWFIWLISNLVVIFSNMQIIYTFISVNLEKELGLTIAQVALANSVYTWTFAILQFFSGATFNVFSSKKIYFFSL STMILGFFVLINSDNFSHLILSQVLIATGASFGFIGAAHTSSICFSAAQFGLMFSLVQTISSLSALVIQILFSNLLAEDA YWKNLIVCIILFGVLIFVLTLFCPNTLPESSSEKRTIKSSMKTVMCSILTVLKLRDIWITSVVGAITFGTFLALNTLWAP RLLGNSELNAMESGIATAILWLGLAVGAPIADRISNLFKNRKHVISAFALLQGVSIIILLYSHLTVHVVYFCMLMFGFFA GGHMLNFTVGSEIVKRKYISTSSSIINGFMFIGSGVIVSMLALFTDHKMALFAIFAILIVAGILNYATKETYSKK >Mature_395_residues MESRAKAWFIWLISNLVVIFSNMQIIYTFISVNLEKELGLTIAQVALANSVYTWTFAILQFFSGATFNVFSSKKIYFFSL STMILGFFVLINSDNFSHLILSQVLIATGASFGFIGAAHTSSICFSAAQFGLMFSLVQTISSLSALVIQILFSNLLAEDA YWKNLIVCIILFGVLIFVLTLFCPNTLPESSSEKRTIKSSMKTVMCSILTVLKLRDIWITSVVGAITFGTFLALNTLWAP RLLGNSELNAMESGIATAILWLGLAVGAPIADRISNLFKNRKHVISAFALLQGVSIIILLYSHLTVHVVYFCMLMFGFFA GGHMLNFTVGSEIVKRKYISTSSSIINGFMFIGSGVIVSMLALFTDHKMALFAIFAILIVAGILNYATKETYSKK
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43516; Mature: 43516
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRAKAWFIWLISNLVVIFSNMQIIYTFISVNLEKELGLTIAQVALANSVYTWTFAILQ CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FFSGATFNVFSSKKIYFFSLSTMILGFFVLINSDNFSHLILSQVLIATGASFGFIGAAHT HHCCCCEEEECCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH SSICFSAAQFGLMFSLVQTISSLSALVIQILFSNLLAEDAYWKNLIVCIILFGVLIFVLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFCPNTLPESSSEKRTIKSSMKTVMCSILTVLKLRDIWITSVVGAITFGTFLALNTLWAP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLGNSELNAMESGIATAILWLGLAVGAPIADRISNLFKNRKHVISAFALLQGVSIIILL HHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSHLTVHVVYFCMLMFGFFAGGHMLNFTVGSEIVKRKYISTSSSIINGFMFIGSGVIVSM HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LALFTDHKMALFAIFAILIVAGILNYATKETYSKK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MESRAKAWFIWLISNLVVIFSNMQIIYTFISVNLEKELGLTIAQVALANSVYTWTFAILQ CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH FFSGATFNVFSSKKIYFFSLSTMILGFFVLINSDNFSHLILSQVLIATGASFGFIGAAHT HHCCCCEEEECCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHH SSICFSAAQFGLMFSLVQTISSLSALVIQILFSNLLAEDAYWKNLIVCIILFGVLIFVLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFCPNTLPESSSEKRTIKSSMKTVMCSILTVLKLRDIWITSVVGAITFGTFLALNTLWAP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLGNSELNAMESGIATAILWLGLAVGAPIADRISNLFKNRKHVISAFALLQGVSIIILL HHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSHLTVHVVYFCMLMFGFFAGGHMLNFTVGSEIVKRKYISTSSSIINGFMFIGSGVIVSM HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LALFTDHKMALFAIFAILIVAGILNYATKETYSKK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA