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The map label for this gene is 225629909

Identifier: 225629909

GI number: 225629909

Start: 49328

End: 49969

Strand: Direct

Name: 225629909

Synonym: WRi_000420

Alternate gene names: NA

Gene position: 49328-49969 (Clockwise)

Preceding gene: 225629907

Following gene: 225629910

Centisome position: 3.41

GC content: 34.74

Gene sequence:

>642_bases
ATGAATGTGAAAAATATCTTATTAGCGTTTTTAGTACAAATGGTATTCAGTTTGCCGCTATTTGCAGCTGATCCTGTTTT
GCTCAACTGCATTGAAACTCCAGAAATATATGACCTTGATGCAAGGCCAAAAAATTTTAACTCTTCAAACAATTTAAGAA
GAAAACCTGGTTCTCCAAATAGTGCAATAGGAGAATTAATACACATAGTAGGTAAAATTACTGATATAAACTGTTTACCA
ATACAAAACGCTGTAGTTTCTATATGGCACGCGAATTCACGCGGCGTGAACCATTACGATAAGAATATAGAGGATGATCT
GAATTTTGCTGGATCAGGAAGGTTTGTAGTGAATAATCTTGGCTATTATAATTTTATTACGATAGCACCTGGTAAAATTG
GTGATAGAGCTCCACATATCAACTTTCTAGTTCAACATCCGGATTTTCCAGAATTCACAACGCAAATGTTTTTTGCTGAC
CATAATTGCGATAATTGCGCTGATCCTGTTCTTGAAGATTTTGTTAGTAATGGGCTTGCAAGCCTTCTCATAACACCATT
TACTTACAGTGATCAGGTCATAAAAACCTATACGTTTAACATTACCTTGGGCGGATATAATAAGTTCTCTAATAAAAGAT
AA

Upstream 100 bases:

>100_bases
TATGATAAGAGGGCTGGCGGAGTTTGTAAAGTAATTTTTTCGTTTCTATTCCCAATAAAAGTTTGTTATATGGTTATGCA
AGAAGTCTATTATAAATGAA

Downstream 100 bases:

>100_bases
AAAACCTTGCATGTAAGGGAGTCCATAGTAAACTTAAGTGTTATTGTACTTAGGATGTATATGAAAAATATCTTACTGAT
GTTTTTGCTATGTTTTATGT

Product: dioxygenase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNVKNILLAFLVQMVFSLPLFAADPVLLNCIETPEIYDLDARPKNFNSSNNLRRKPGSPNSAIGELIHIVGKITDINCLP
IQNAVVSIWHANSRGVNHYDKNIEDDLNFAGSGRFVVNNLGYYNFITIAPGKIGDRAPHINFLVQHPDFPEFTTQMFFAD
HNCDNCADPVLEDFVSNGLASLLITPFTYSDQVIKTYTFNITLGGYNKFSNKR

Sequences:

>Translated_213_residues
MNVKNILLAFLVQMVFSLPLFAADPVLLNCIETPEIYDLDARPKNFNSSNNLRRKPGSPNSAIGELIHIVGKITDINCLP
IQNAVVSIWHANSRGVNHYDKNIEDDLNFAGSGRFVVNNLGYYNFITIAPGKIGDRAPHINFLVQHPDFPEFTTQMFFAD
HNCDNCADPVLEDFVSNGLASLLITPFTYSDQVIKTYTFNITLGGYNKFSNKR
>Mature_213_residues
MNVKNILLAFLVQMVFSLPLFAADPVLLNCIETPEIYDLDARPKNFNSSNNLRRKPGSPNSAIGELIHIVGKITDINCLP
IQNAVVSIWHANSRGVNHYDKNIEDDLNFAGSGRFVVNNLGYYNFITIAPGKIGDRAPHINFLVQHPDFPEFTTQMFFAD
HNCDNCADPVLEDFVSNGLASLLITPFTYSDQVIKTYTFNITLGGYNKFSNKR

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: NA

Molecular weight: Translated: 23844; Mature: 23844

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKNILLAFLVQMVFSLPLFAADPVLLNCIETPEIYDLDARPKNFNSSNNLRRKPGSPN
CCHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCH
SAIGELIHIVGKITDINCLPIQNAVVSIWHANSRGVNHYDKNIEDDLNFAGSGRFVVNNL
HHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECC
GYYNFITIAPGKIGDRAPHINFLVQHPDFPEFTTQMFFADHNCDNCADPVLEDFVSNGLA
CEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHEEEEECCCCCCHHHHHHHHHHHCCHH
SLLITPFTYSDQVIKTYTFNITLGGYNKFSNKR
HHEECCCCCCCCEEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNVKNILLAFLVQMVFSLPLFAADPVLLNCIETPEIYDLDARPKNFNSSNNLRRKPGSPN
CCHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCH
SAIGELIHIVGKITDINCLPIQNAVVSIWHANSRGVNHYDKNIEDDLNFAGSGRFVVNNL
HHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECC
GYYNFITIAPGKIGDRAPHINFLVQHPDFPEFTTQMFFADHNCDNCADPVLEDFVSNGLA
CEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHEEEEECCCCCCHHHHHHHHHHHCCHH
SLLITPFTYSDQVIKTYTFNITLGGYNKFSNKR
HHEECCCCCCCCEEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA