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The map label for this gene is 225629903

Identifier: 225629903

GI number: 225629903

Start: 41921

End: 43555

Strand: Reverse

Name: 225629903

Synonym: WRi_000330

Alternate gene names: NA

Gene position: 43555-41921 (Counterclockwise)

Preceding gene: 225629904

Following gene: 225629902

Centisome position: 3.01

GC content: 36.94

Gene sequence:

>1635_bases
ATGAATATAAACAAAAATGAGTTTTTATTTCTTCCGCTTGGGGGAGTAGGAAGAATCGGGATGAATGTTAGCCTATATCA
TTACCAAGGTAAGTGGATTATGATCGACCTTGGTGTTGGTTTTGCAGATGAAACTATGCCAGGTGTTGAGCTGCTCATTG
CTGATATAGATTTTATTGCTCAAAGAAAAAAAGATTTACTTGGAATAATAATTACACATGCACATGAGGACCACTGCGGT
GCAGTGCCCCACTTGTGGGAAGAGTTGCAGTGCTCCATATATACAACAAAGTTTACGGTTAATTTTCTTAAAGAAAAACT
AAAAGAATTTCGATTGGAAGGTATAGTGCCTGTAAAAGAGGTAGACATAAATGGCAGCATAAATTTGGGTCCTTTTACCG
TCGAGTTTATAAATGTAACTCATTCAATTCCTGAGGCAAATTCAATATTAATTAGCACTGAAATGGGTAGTGCACTCCAT
ACCGGAGACTGGAAATTTGATCCAAAACCTGTTGTTGGATTAACTTCTAATATGGAGCGTCTAAAAGAAATTGGCGATAA
AGGTGACCTGCTTGCAGCAATTTGCGATTCAACCAATATATTAAGCAAGCATCACCCTGAGTCAGAAGGTGAAATTTATA
ATAATATTTATAACATAATAAAGCGGTCTAAAAAATTAGTTGCTGTTTCGCTATTCGCTTCAAATGTGGCACGAATTGAA
ACGATAAGCCAAGCTGCAAAAGCACTAAATAGAAAAGTAGTTTTACTTGGTAGATCTTTATGGAGAATAGTGAAAGTTGC
GCAAGATAGTGGTTATTTAACTGATTCTCCTCAGTTTCTTGAAGCAAAGGAAGCAGTAAATTTTCCAAGGGAAGAACTGG
TGCTACTTTGCACAGGTTGTCAAGGTGAGCCACTGGCAGCTACCGCAAGACTTGCTGCTAAGAGTCATCAAGCATTTAAA
ATGCAGCAAGGTGATACCATGATCTTTTCGTCAAAAATCATTCCTGGAAATGAAACTCGTGCGCACAACATGCTCAATGC
CTTTATTGAGATGGGGGTAGAAGTTATTACTGAAAAAACAGAGCATGTTCATGCTTCTGGGCATCCAACAAGAGAAGAGC
TAAAGGAAATGTATTCTTTAATAAAACCGAAGATGTCTATTCCAGTTCACGGCGAATATATTCACACGCATGCACATGTA
AAATTTGCTAAAGAGTGCGGTGTGGCAAAAGCAATAATGATTGCACCAGGTGATATTGTTAATTTGGAGAACGGAGAAAA
AGTTGATTCAATTGATGTTGACTACTTTGGTATTGATGGTATGCTGCTACGTCATCCGGAGAGCAGTGTTATAAAAATGC
GTAAAAGAATGAGAGATGCCGGAGTTATTGTGGTAACAGCAGTTGTAAACAAGAAAAATAAATTGCTTGCTAAACCAAAA
GTATTTGTACCTGGTGTTTTTGAAGTGCTAGAAGATGCAGCTACCATACAGAAAATTGTCAAGAAAGTTGAGTCGTTGTT
TAGTTTGCAGCCAACAAAAAAAATTAAAAATAAGATTGAAAGTTCAATATTGAGTATCTTAAAGGAATATTTACTAAAAA
GGCCTATAATTGAGGTTCAGATAGAACAGGTATGA

Upstream 100 bases:

>100_bases
AACAGAAACTTCTTAGTTCCTTAAAACTATGTAAAAGCAATAAATTTCTTTATTTAAGGTCGAAGTTTTGCTATTCTCAG
GTTTTAATAATTTAAATTTA

Downstream 100 bases:

>100_bases
AATGAATGAAGCTATTCGTTCATCTGGTGTTATTTATTTCGTTATTTATTCCTTATTTTACAAAAGCTGCTTTATATGTT
GATATAAAAAAAAGCAGTGT

Product: Predicted hydrolase of the metallo-beta-lactamase superfamily

Products: NA

Alternate protein names: RNase J1 [H]

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGVGFADETMPGVELLIADIDFIAQRKKDLLGIIITHAHEDHCG
AVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKEVDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALH
TGDWKFDPKPVVGLTSNMERLKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIE
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGCQGEPLAATARLAAKSHQAFK
MQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKTEHVHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHV
KFAKECGVAKAIMIAPGDIVNLENGEKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPK
VFVPGVFEVLEDAATIQKIVKKVESLFSLQPTKKIKNKIESSILSILKEYLLKRPIIEVQIEQV

Sequences:

>Translated_544_residues
MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGVGFADETMPGVELLIADIDFIAQRKKDLLGIIITHAHEDHCG
AVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKEVDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALH
TGDWKFDPKPVVGLTSNMERLKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIE
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGCQGEPLAATARLAAKSHQAFK
MQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKTEHVHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHV
KFAKECGVAKAIMIAPGDIVNLENGEKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPK
VFVPGVFEVLEDAATIQKIVKKVESLFSLQPTKKIKNKIESSILSILKEYLLKRPIIEVQIEQV
>Mature_544_residues
MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGVGFADETMPGVELLIADIDFIAQRKKDLLGIIITHAHEDHCG
AVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKEVDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALH
TGDWKFDPKPVVGLTSNMERLKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIE
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGCQGEPLAATARLAAKSHQAFK
MQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKTEHVHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHV
KFAKECGVAKAIMIAPGDIVNLENGEKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPK
VFVPGVFEVLEDAATIQKIVKKVESLFSLQPTKKIKNKIESSILSILKEYLLKRPIIEVQIEQV

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 60613; Mature: 60613

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGVGFADETMPGVELLIADIDFIA
CCCCCCCEEEEECCCCCEECCEEEEEEEECEEEEEECCCCCCCCCCCCHHEEHHHHHHHH
QRKKDLLGIIITHAHEDHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKE
HHHHHHEEEEEEECCCCCCCCHHHHHHHHEEEEEEEHEEHHHHHHHHHHHHHCCCCCEEE
VDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNMER
ECCCCCEECCCEEEEEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCCCEECCCCHHH
LKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIE
HHHCCCCCCEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGC
HHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHEEEEEECC
QGEPLAATARLAAKSHQAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKT
CCCCCHHHHHHHHHCCHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHVHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPGDIV
HEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCEE
NLENGEKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPK
ECCCCCCCCEEECEEECCCCEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCC
VFVPGVFEVLEDAATIQKIVKKVESLFSLQPTKKIKNKIESSILSILKEYLLKRPIIEVQ
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
IEQV
EECC
>Mature Secondary Structure
MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGVGFADETMPGVELLIADIDFIA
CCCCCCCEEEEECCCCCEECCEEEEEEEECEEEEEECCCCCCCCCCCCHHEEHHHHHHHH
QRKKDLLGIIITHAHEDHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKE
HHHHHHEEEEEEECCCCCCCCHHHHHHHHEEEEEEEHEEHHHHHHHHHHHHHCCCCCEEE
VDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNMER
ECCCCCEECCCEEEEEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCCCEECCCCHHH
LKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIE
HHHCCCCCCEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGC
HHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHEEEEEECC
QGEPLAATARLAAKSHQAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKT
CCCCCHHHHHHHHHCCHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHVHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPGDIV
HEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCEE
NLENGEKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPK
ECCCCCCCCEEECEEECCCCEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCC
VFVPGVFEVLEDAATIQKIVKKVESLFSLQPTKKIKNKIESSILSILKEYLLKRPIIEVQ
EECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
IEQV
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA