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The map label for this gene is gatC [H]

Identifier: 225629901

GI number: 225629901

Start: 40258

End: 40611

Strand: Direct

Name: gatC [H]

Synonym: WRi_000310

Alternate gene names: 225629901

Gene position: 40258-40611 (Clockwise)

Preceding gene: 225629900

Following gene: 225629907

Centisome position: 2.78

GC content: 33.62

Gene sequence:

>354_bases
ATGCCAGCTAAGTCAACAGAAGACGTTATTACTTCACTAATAGAATTTGCAAATAAGAGAAAAATAACAATTACCAAGGA
AGAAATGCTTAAAATTGCACAGCTTGTAAGGATTAAGTTATCAAATGACGAGATTGATCACTACTCCAAAGAACTGACAA
TGCTGGATTGGATACATGATACTTTATTGCAAGTTAATACTGAAGGTGTTTCTCCTATGCGTTATGGCAGTATAGACAAG
GACATTCATGTACGCGATGATGTTATAAATTCTCAAAATATTAAAGAAGAGATATTGTCCAATACAAAACCTGAGCATGG
GTATTTTGTAGTGCCAAAGGTTATAAGCGATTAA

Upstream 100 bases:

>100_bases
GTGATTACGGATACCATACTTCACAAACTTGAAAAAACTGGTAAAATAGAAGTTGTTTCGGTTGTAAATATTTTAACTCA
CTTCATCCAAGGAGGTAGAA

Downstream 100 bases:

>100_bases
AGTAAAATAAGGCTCATATCAAACCTATAATAGATCTACTTTCAAAAATAAGACCAATCCGGTAAAGAAGCATTTGTGGG
AGTGGAAACCATTTTTTGAT

Product: glutamyl-tRNA(Gln) amidotransferase, C subunit, putative

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPAKSTEDVITSLIEFANKRKITITKEEMLKIAQLVRIKLSNDEIDHYSKELTMLDWIHDTLLQVNTEGVSPMRYGSIDK
DIHVRDDVINSQNIKEEILSNTKPEHGYFVVPKVISD

Sequences:

>Translated_117_residues
MPAKSTEDVITSLIEFANKRKITITKEEMLKIAQLVRIKLSNDEIDHYSKELTMLDWIHDTLLQVNTEGVSPMRYGSIDK
DIHVRDDVINSQNIKEEILSNTKPEHGYFVVPKVISD
>Mature_116_residues
PAKSTEDVITSLIEFANKRKITITKEEMLKIAQLVRIKLSNDEIDHYSKELTMLDWIHDTLLQVNTEGVSPMRYGSIDKD
IHVRDDVINSQNIKEEILSNTKPEHGYFVVPKVISD

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: NA

Molecular weight: Translated: 13468; Mature: 13336

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKSTEDVITSLIEFANKRKITITKEEMLKIAQLVRIKLSNDEIDHYSKELTMLDWIHD
CCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TLLQVNTEGVSPMRYGSIDKDIHVRDDVINSQNIKEEILSNTKPEHGYFVVPKVISD
HHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEECHHHCC
>Mature Secondary Structure 
PAKSTEDVITSLIEFANKRKITITKEEMLKIAQLVRIKLSNDEIDHYSKELTMLDWIHD
CCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TLLQVNTEGVSPMRYGSIDKDIHVRDDVINSQNIKEEILSNTKPEHGYFVVPKVISD
HHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA