Definition Brachyspira hyodysenteriae WA1 chromosome, complete genome.
Accession NC_012225
Length 3,000,694

Click here to switch to the map view.

The map label for this gene is ygcA

Identifier: 225619621

GI number:

Start: 807874

End: 809070

Strand: Reverse

Name: ygcA

Synonym: BHWA1_00680

Alternate gene names: NA

Gene position: NA

Preceding gene: 225619622

Following gene: 225619620

Centisome position: NA

GC content: NA

Gene sequence:

>1197_bases
ATGGAAGTTAAAATTATAGATACTGCTTATGGCGGATATGGAATTGCAAAAGATGAAAATGGAAAGGTTATATTTATACC
TCATAGTGTTGAAGGCGATATATTAGATATCACTATAACTAAAGAAAGTAAAAAATTTTCTTATGCCTCTATAAATAAAA
TACTAGAATCTTCTAAGTTTAGAATAAAACCAAAATGTAAATATGCCGGTATTTGCGGAGGATGTTTATTTAATCATATA
GAATATAATAAACAATTAGATACAAAAAAGAATGTTGTTTTAAATGCTATTAGAAATATTGACTTTAATAATGATATAAA
AATGATTTACGGTGAAAATATTAATTATAGGCTTAGAGTTAATATGATAGCTGATAATGGTAAAATTGGTTTTTATAGAT
TTAAAAGCAATGATTTTGTAAATATTGATGAATGTATTATTTTAAAAGAAAGTTTATTTGAAAAGATAAAGAATTTTGCA
TCTGAAAATAATATCACAGGAAGTATTTATGCTATAGAAAATAATAATAATGAAGCACTTGCATTCATTGAACTTAATAA
AAAAATAAATATAAAATGTTTTGAAAAATATTTTAAAGGAATAACTATAAAGAACAATAAAAATATTAAAAGTTACGGAA
GTGATACTATACTATATAAAACTAAATACGGTAATATTCCAATAGGGCATAAAACATTTTTTCAAAGTAATTTATATCTT
CTTGATGATTTTCAGTATAATGTTATTAAATATTTAAGTGATAATGACAGTAGTATAGTTGAGCTTTATGCTGGAAGCGG
ATTTTTTACATCTGCTTTAGAAAATAAAATAAAAAGTTTTAATAATCATTATAAATTTATAGCTTCAGAGATAAATAAAG
ATTCTGTATTAATAGCAAATAAATATGATTTAAAAATAAAAAATGAAGATGCTTTAATAACATTAAAAAATATTGATTAT
GATATTGATGCTTTGATATTAGATCCTCCTAGAGAAGGAATGAATAAAAATGTGGTAGAAGAAATAATAAGGATTAAGCC
TAAAAAAATTATATATGTTTCATGCGACCCTATGACTTTTGCCCGCGATATTAATCTATTAAAAGAGTATTATAATTTAT
CAGATTTAAATATTATAGATATGTTTGCTGATACTTATCATATAGAGCTTATTTCTTTTTTAGAATATAAAGATTGA

Upstream 100 bases:

>100_bases
TATAGCTAGAAGTCTTAAAAAATCAGGTTTAGATGATAAATTTATAAGTGAAAATACAGGATTAACTATAGAGGAAATAG
AGAAACTTTAATATAAATTT

Downstream 100 bases:

>100_bases
ATATAATATTTTAATTCTTGTTATTAATATGTTACATGATATAATTAATCAAATAAATATAAAATTGGAATAAATCAATA
ATGATAAATAAAAAACTCAT

Product: TrmA family RNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>398_residues
MEVKIIDTAYGGYGIAKDENGKVIFIPHSVEGDILDITITKESKKFSYASINKILESSKFRIKPKCKYAGICGGCLFNHI
EYNKQLDTKKNVVLNAIRNIDFNNDIKMIYGENINYRLRVNMIADNGKIGFYRFKSNDFVNIDECIILKESLFEKIKNFA
SENNITGSIYAIENNNNEALAFIELNKKINIKCFEKYFKGITIKNNKNIKSYGSDTILYKTKYGNIPIGHKTFFQSNLYL
LDDFQYNVIKYLSDNDSSIVELYAGSGFFTSALENKIKSFNNHYKFIASEINKDSVLIANKYDLKIKNEDALITLKNIDY
DIDALILDPPREGMNKNVVEEIIRIKPKKIIYVSCDPMTFARDINLLKEYYNLSDLNIIDMFADTYHIELISFLEYKD

Sequences:
NA

Specific function: NA

COG id: COG2265

COG function: function code J; SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA