Definition Brachyspira hyodysenteriae WA1 chromosome, complete genome.
Accession NC_012225
Length 3,000,694

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 225619051

GI number:

Start: 110371

End: 111675

Strand: Reverse

Name: Not Available

Synonym: BHWA1_00101

Alternate gene names: NA

Gene position: NA

Preceding gene: 225619052

Following gene: 225619050

Centisome position: NA

GC content: NA

Gene sequence:

>1305_bases
ATGATTAATAATTCTTTATCAGCAAATACTTCAATACGAACTGCAATAAAAAATGATTTAAGACTCAATTATCAAACTAG
AGTATGGCTTGATGTTATAGCATTGCCTGCCATAGAACTTAAAGAAAAGATAGAAAAAGCAATGGAAGAAAATCCATTCT
TAGAATATGATTTTAATGATAATTATTCAAAACCATCATCAGCGGGAAGCGATATCAATTCTATAATAGAAAACACAGTA
GAAAATAATAAAGAAAGTTTATTTTCTCATTTGAAAAGTCAGATAGATATTACTTTTAATGATAAAAAAGAAATAGAGCT
TGCAGAACAGATATGCAGTTTTATAAATGAAGACGGATATTTAACCATTGAAAGTGATGAGATTTCAAATATATTGAATG
CTGATATAAAGCAAATAGAAAAAATAATTTCTATAATAAAAACATTTGATCCTTACGGAGTTGGAGCAAAAAATATTAAT
GAATGCCTCTCTATACAATTAAAGATGAAAAAAAAAGAAGCAGATGAAAAAGAAATATATGATACAGCAATAAATATTGT
AGAAAATTATTTAGATGAATTATCAAAAAAGAATTATGATAAAATAGCTTTAAATTTAAACATAGAAGTTAATACAGTAT
TAAAAGCTTTAAAATTAATACAAACATTAGAACCCTATCCAGCAAGAGAATATGATACATCCTCTGTAAAATATATAGTT
CCTGAATTATTTATTTTTAAGGAAAATGATAATTGGTTTGTAAAAACAGATGAAACTTTTATCCCCCACTTGAAAATTAG
CAAAAAATATATTAAACTATTAGATAGAGAGGAAAGTAAAGATAGCATAAACTTTTTAAAAGAAAAAAAGAAAGAAGCTG
AAAGCCTTATAAATGCATCTAATGACAGAAAAAAAACTTTATTAAAAATAGGCGAAGCTTTGCTTAAATTTCAGATAAAT
TTCTTTGAGTACGGAAAAGAGTTTATGAAGCCATTAACTTTAAAAGATATGTCTTTGGAGGTGAATTTAAGCGAATCCAC
TATAAGCAGAATAGCTAATGGTAAGTATCTTAACACTGTTTGGGGTACATTTTCTATAAAATACTTTTTCTCTAGAGCTG
TTAATGGCGGGCTTGGTTCTAGAGGCGTTAAAGAAATTATAAAAAGAATTATAGAAAACTCTCCGGCAAAATTAAGCGAT
GAAAAGATCAGACTTATACTAAAAAGCGAAGGTATAGATATATCAAGAAGAACCGTAGCTAAATACAGAAAAAGTATGAA
TATTTTTTCATCAAGAAACAGATAA

Upstream 100 bases:

>100_bases
GAATTAGAAAAGCATAATAAATTCGGTAAAATAATTTCTCCTTTTGATATAGAAAAAAGATTTATCAGCACAATGATTCA
TTATTTATCCATAGGTTTTT

Downstream 100 bases:

>100_bases
AACAAAAGGAGATTTTATGCATCAAAATATCATTGGAAAGAACGTTAGAATCACTAAAAATGTTAGAGAACATATAGCAA
ATAAGATGCAAAATATCAAA

Product: RNA polymerase sigma-54 subunit RpoN

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>434_residues
MINNSLSANTSIRTAIKNDLRLNYQTRVWLDVIALPAIELKEKIEKAMEENPFLEYDFNDNYSKPSSAGSDINSIIENTV
ENNKESLFSHLKSQIDITFNDKKEIELAEQICSFINEDGYLTIESDEISNILNADIKQIEKIISIIKTFDPYGVGAKNIN
ECLSIQLKMKKKEADEKEIYDTAINIVENYLDELSKKNYDKIALNLNIEVNTVLKALKLIQTLEPYPAREYDTSSVKYIV
PELFIFKENDNWFVKTDETFIPHLKISKKYIKLLDREESKDSINFLKEKKKEAESLINASNDRKKTLLKIGEALLKFQIN
FFEYGKEFMKPLTLKDMSLEVNLSESTISRIANGKYLNTVWGTFSIKYFFSRAVNGGLGSRGVKEIIKRIIENSPAKLSD
EKIRLILKSEGIDISRRTVAKYRKSMNIFSSRNR

Sequences:
NA

Specific function: NA

COG id: COG1508

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA