Definition Campylobacter lari RM2100, complete genome.
Accession NC_012039
Length 1,525,460

Click here to switch to the map view.

The map label for this gene is typA

Identifier: 222824498

GI number:

Start: 1463336

End: 1465144

Strand: Reverse

Name: typA

Synonym: Cla_1516

Alternate gene names: NA

Gene position: NA

Preceding gene: 222824503

Following gene: 222824497

Centisome position: NA

GC content: NA

Gene sequence:

>1809_bases
TTGGATAATATCAGAAATATAGCCGTTATAGCTCACGTTGATCATGGTAAAACAACTATGGTAGATGAGCTTTTAAAACA
ATCAGGAACTTTTAGCGAGCGTGAGCAAATAGCAGAACGCGTTATGGATAGCAATGATATAGAAAAAGAAAGAGGTATTA
CTATACTTTCTAAAAATACTGCTATTAATTATAAAGGCACTAAAATAAATATCATAGACACTCCAGGCCATGCTGATTTT
GGTGGTGAGGTTGAGCGCGTTTTAAAAATGGTAGATGGGGTTTTGCTTTTAGTTGATGCTCAAGAAGGGGTAATGCCACA
AACTAAATTCGTTGTAAAAAAAGCTTTATCTTTGGGGCTTAAACCTATAGTTGTGATTAATAAAATAGATAAACCAGCAG
CTGATCCAGAGCGTGTGATAAATGAAATTTTTGATCTTTTTGTGGCTTTAGAAGCAAATGATGAGCAACTTGATTTTGCT
GTAGTTTATGCAGCTGCTAAAAACGGCTATGCAAAATTAAATTTAGAAGATGATAGTTCTAATATGGAGCCTTTATTTAA
AACCATATTAGAGCGCGTTCCAGCTCCAAGTGGTAGCGATGAAAATCCTTTGCAACTTCAAGTTTTTACCTTAGGTTATG
ATAATTTTGTTGGTAAAATAGGAATTGCAAGAATTTTCAATGGTAAAGTGAAAAAAAATCAAAATGTGATGCTTGCTAAG
GCAGATGGTTCTAAAATCAATGGAAGAATTTCAAAGCTTATTGGCTTTATGGGCTTAGAAAAAATGGACATAGAAGAAGC
TGGGACAGGCGATATTGTAGCGATTGCAGGTTTTGAAGCTTTAGATGTAGGAGATAGTGTTGTTGATCCAAACAATCCTA
TGCCACTTGATCCTTTACATATAGAAGAACCAACTTTAAGTATAGTATTTTCAGTAAATGATGGTCCTTTAGCTGGTACT
GAAGGTAAGCATGTGACTTCAAATAAAATAGCAGAACGCTTAGAAGCTGAGATGAAAACAAATATTGCTATGAAATATGA
AAGCACAGGCGAGGGTAAATTTAAAGTTAGCGGAAGAGGCGAGCTTCAAATAACTATCTTAGCTGAAAATATGCGTAGAG
AAGGTTTTGAATTTTGTATGGGAAGACCAGAAGTTATCGTTAAGGTAGAAGATGGGATAAAAACCGAACCATTTGAACAC
TTAGTGATTGATGTGCCTGATGATTTTACTGGTGTGGTTATTGAAAAACTAGGCAAAAGAAAAGCTGAAATGAAAACTAT
GACTCCAACTGGAGATGGTCAAACAAGATTAGAATTTGAAATTCCAGCACGCGGGCTTATAGGCTTTAGAAGTCAATTTT
TAACAGATACTAAAGGCGAAGGTGTGATGAATCATAGCTTTTTAGAATTTCGCCCATTTAGCGGGGCAGTTGAAAAAAGA
AATAATGGCGCGTTAATTTCTATGGAAAATGGCGTAGCTTTGGGGTATTCTTTATTTAATCTTCAAGATAGAGGAGTTTT
ATTTATAGAGCCTCAAACTAAAGTTTATACAGGTATGATTATAGGCGAGCACTCTCGTCCAAATGATTTAGATGTAAATC
CTATAAAAGGTAAAAATTTAACCAATGTTAGAGCAAGTGGAAGTGATGATGCTATAAAATTAGTTCCACCTAGAAAATTA
AGCCTTGAAAGAGCATTAGAGTGGATAGAAGAAGATGAACTTGTAGAAGTTACTCCACAAAATATTAGAGTTAGAAAAAG
ATATCTTGATCCTACTCAAAGAAAAAGAATGGAAAAGGCTAAATCTTAA

Upstream 100 bases:

>100_bases
CCAAACAAAAGCAACAAGTGTTCCAATTTTGCAATCTTAATTTTTAAGCAATTTTTTTATATAATATTAGATTTTAAATT
TAAGACTTTGGAGAAAAAAC

Downstream 100 bases:

>100_bases
TGGATTTTGAAGCCATAAGAGTAGGCTTAAACAAAAGATATAAAGCTTTGCAAATTTTAGCATTTGTTGAAGCTTTAATC
GTATTTTTTTTGATATTTCA

Product: GTP-binding protein TypA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>602_residues
MDNIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQIAERVMDSNDIEKERGITILSKNTAINYKGTKINIIDTPGHADF
GGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALEANDEQLDFA
VVYAAAKNGYAKLNLEDDSSNMEPLFKTILERVPAPSGSDENPLQLQVFTLGYDNFVGKIGIARIFNGKVKKNQNVMLAK
ADGSKINGRISKLIGFMGLEKMDIEEAGTGDIVAIAGFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGT
EGKHVTSNKIAERLEAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDGIKTEPFEH
LVIDVPDDFTGVVIEKLGKRKAEMKTMTPTGDGQTRLEFEIPARGLIGFRSQFLTDTKGEGVMNHSFLEFRPFSGAVEKR
NNGALISMENGVALGYSLFNLQDRGVLFIEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKL
SLERALEWIEEDELVEVTPQNIRVRKRYLDPTQRKRMEKAKS

Sequences:
NA

Specific function: NA

COG id: COG1217

COG function: function code T; Predicted membrane GTPase involved in stress response

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA