| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527228
Identifier: 222527228
GI number: 222527228
Start: 4956472
End: 4956939
Strand: Direct
Name: 222527228
Synonym: Chy400_4012
Alternate gene names: NA
Gene position: 4956472-4956939 (Clockwise)
Preceding gene: 222527227
Following gene: 222527231
Centisome position: 94.07
GC content: 65.6
Gene sequence:
>468_bases ATGATAGCAGCGAAAGTAGCCGTTGGATCAGACCATGGGGAAGACGTCCAGCCTGCGCACCAGCGGCCACGGCCAGCACC TGCCGGCGGTGGAGGGGATACCTGCACGCAGGCCGGAAGCCTGCGCCACAGGGAGCGCTTGGATCCCGACCTAACGCAGC GCGACATGTGGGTAATGCATAGCCCCAGCGGAGATACGCTCTTGTCTCCTCCCCCCAGCGGGGATACACTCATATCTCCT CCCCCCAGCGGGGGGAGGCCGGGAGGGGGGCCGGGATTGCGGTGCGCGACCACCAGTATGGAGCACGCCCACCATCCTCC CCCGCTCCTCTCCCACGAGGGAGAGGAGCGGGGGCAGGGGGGTGAGGTGAGGGGGGCCGGGATTGCGGTGCACGGGAGTC ATCAGGAGCAAACCCATCTCCACTCTCCCCTACACCCTACACCCTATCTTCTCTCTCCTATCTCCTAA
Upstream 100 bases:
>100_bases CGCTTCGCTCATCAGTCGAACCTATCTCATTGTGCGCGATCCTGTGCACTATCGCGTCACCCTGTTGTAGCGTGGGTCTT ACGTCACGAACGGAAAGCGG
Downstream 100 bases:
>100_bases CCAGCCACCGTACCCACCGGCGCCTCCAGAAAGAAGCGACCTTCCGCATCGTCATACGCGAACAGCTCGGCATAGCGTCC CCACTCCAGCGCAATATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIAAKVAVGSDHGEDVQPAHQRPRPAPAGGGGDTCTQAGSLRHRERLDPDLTQRDMWVMHSPSGDTLLSPPPSGDTLISP PPSGGRPGGGPGLRCATTSMEHAHHPPPLLSHEGEERGQGGEVRGAGIAVHGSHQEQTHLHSPLHPTPYLLSPIS
Sequences:
>Translated_155_residues MIAAKVAVGSDHGEDVQPAHQRPRPAPAGGGGDTCTQAGSLRHRERLDPDLTQRDMWVMHSPSGDTLLSPPPSGDTLISP PPSGGRPGGGPGLRCATTSMEHAHHPPPLLSHEGEERGQGGEVRGAGIAVHGSHQEQTHLHSPLHPTPYLLSPIS >Mature_155_residues MIAAKVAVGSDHGEDVQPAHQRPRPAPAGGGGDTCTQAGSLRHRERLDPDLTQRDMWVMHSPSGDTLLSPPPSGDTLISP PPSGGRPGGGPGLRCATTSMEHAHHPPPLLSHEGEERGQGGEVRGAGIAVHGSHQEQTHLHSPLHPTPYLLSPIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16146; Mature: 16146
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAAKVAVGSDHGEDVQPAHQRPRPAPAGGGGDTCTQAGSLRHRERLDPDLTQRDMWVMH CCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEE SPSGDTLLSPPPSGDTLISPPPSGGRPGGGPGLRCATTSMEHAHHPPPLLSHEGEERGQG CCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCC GEVRGAGIAVHGSHQEQTHLHSPLHPTPYLLSPIS CCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIAAKVAVGSDHGEDVQPAHQRPRPAPAGGGGDTCTQAGSLRHRERLDPDLTQRDMWVMH CCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCCCCCEEEEE SPSGDTLLSPPPSGDTLISPPPSGGRPGGGPGLRCATTSMEHAHHPPPLLSHEGEERGQG CCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCC GEVRGAGIAVHGSHQEQTHLHSPLHPTPYLLSPIS CCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA