| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527208
Identifier: 222527208
GI number: 222527208
Start: 4939094
End: 4940149
Strand: Direct
Name: 222527208
Synonym: Chy400_3992
Alternate gene names: NA
Gene position: 4939094-4940149 (Clockwise)
Preceding gene: 222527207
Following gene: 222527209
Centisome position: 93.74
GC content: 58.24
Gene sequence:
>1056_bases ATGACGGAAAAGAAAACCCGCAGAAAACACATCAGATATGCGGAGGGCCAGTGGTTTGCTGTGCCTTTGAAGGACGGTGG CTACGCTTTGGGGATCATCGTGCGCGGCAGCTCCAAAACCAGAGGTGGGCTGGGCTATTTCTTTGGCCCGCGCTATCCAG ACGTTCCCGATGAGGACGAAACCTGGCGCAAACAGCCCGCGGAGGCGATTCTTATTGCTCGGTTCGGCGACCTGGGGATC ATCCGGGGACAGTGGCCGCTGATTGCCAGCACCCGTCCTTTCCGCCGCGAGGACTGGCCGGTGCCCAAGTTTCATCGCGT TGACGCCCTCAACCCCGATAAGGGTTGGCTCGTCGAGTATCACCAGGATATGAATGGATTTGCTCCCCCCGAGCGAGAGA CGTACACGGACACAAAAAAAATAGCCCATCTCCCAGAAGATCGCGTTTGCGGCTATGTATCGGTTGAGATCGAGTTGACG ACACTCATTTCTGCGCACGAGATTGCCTTATTCGGCGAGCCTCGCGGCAGGCGCATCAAATACGGCGAAGGCCAGTGGTT TGCCGTGCCGTTGCCGGATGGCGGCTATGGTCTGGGGATCATCGTGCGCGGCAGCTCCAAAACCAGAGGCGGGCTGGGCT ATTTCTTTGGCCCGCGCTATCCAGACGTTCCCGATGAGGACGAAACCTGGCGCAAACAGCCCGCGGATGCAGTTCTTGTC GCGTGGTTCTTGGACGATGGGATCAGCTGGGGGCAGTGGCCGCTGATCCCCAGCACTCGACCCTTTCGCCGCGAAGAATG GCCGGTGCCTGCGTTTTGGCGCTTTGAGCCGGGTAACCTGGGTAAGGGCTGGGTTGTTGCGTATCGCCAGGATGATGATG GGTCGAAGATTCCTGAGCAGCAAACCTATGTGGATGCGAAAAGGGCAGGCCGCCTTCCAGACGATAGGGTTGATAGCTTT GCGGGTATTGAGTCACGGTTAGAGACGATCTTTTCTGACCAGGAGCGCTCATTGAAGAAAGCCCGCAGGAAGCCCGATGC GGGTGCTGAAGGATAG
Upstream 100 bases:
>100_bases AAAATCGCCTGCGCCCCATCAGCCCCCGCAATCCGCACAGGTCCCAGTATCTGGAGGCTGCACGACAGTTCGAGGCAAGT AGGGGTCAGGAGTAACGCCG
Downstream 100 bases:
>100_bases CAGTTGCCATTCGCCCGAAGGACGGCAAATGCGTGTTGGCGATCACTGGGTGATATGGACAGGTTGTTTCTTCGGTCCGT GCTCCTGGAAAGCTCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTEKKTRRKHIRYAEGQWFAVPLKDGGYALGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPAEAILIARFGDLGI IRGQWPLIASTRPFRREDWPVPKFHRVDALNPDKGWLVEYHQDMNGFAPPERETYTDTKKIAHLPEDRVCGYVSVEIELT TLISAHEIALFGEPRGRRIKYGEGQWFAVPLPDGGYGLGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPADAVLV AWFLDDGISWGQWPLIPSTRPFRREEWPVPAFWRFEPGNLGKGWVVAYRQDDDGSKIPEQQTYVDAKRAGRLPDDRVDSF AGIESRLETIFSDQERSLKKARRKPDAGAEG
Sequences:
>Translated_351_residues MTEKKTRRKHIRYAEGQWFAVPLKDGGYALGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPAEAILIARFGDLGI IRGQWPLIASTRPFRREDWPVPKFHRVDALNPDKGWLVEYHQDMNGFAPPERETYTDTKKIAHLPEDRVCGYVSVEIELT TLISAHEIALFGEPRGRRIKYGEGQWFAVPLPDGGYGLGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPADAVLV AWFLDDGISWGQWPLIPSTRPFRREEWPVPAFWRFEPGNLGKGWVVAYRQDDDGSKIPEQQTYVDAKRAGRLPDDRVDSF AGIESRLETIFSDQERSLKKARRKPDAGAEG >Mature_350_residues TEKKTRRKHIRYAEGQWFAVPLKDGGYALGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPAEAILIARFGDLGII RGQWPLIASTRPFRREDWPVPKFHRVDALNPDKGWLVEYHQDMNGFAPPERETYTDTKKIAHLPEDRVCGYVSVEIELTT LISAHEIALFGEPRGRRIKYGEGQWFAVPLPDGGYGLGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPADAVLVA WFLDDGISWGQWPLIPSTRPFRREEWPVPAFWRFEPGNLGKGWVVAYRQDDDGSKIPEQQTYVDAKRAGRLPDDRVDSFA GIESRLETIFSDQERSLKKARRKPDAGAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40008; Mature: 39877
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKKTRRKHIRYAEGQWFAVPLKDGGYALGIIVRGSSKTRGGLGYFFGPRYPDVPDEDE CCCHHHHHHHCEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCH TWRKQPAEAILIARFGDLGIIRGQWPLIASTRPFRREDWPVPKFHRVDALNPDKGWLVEY HHHHCCCCEEEEEEECCEEEEECCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEE HQDMNGFAPPERETYTDTKKIAHLPEDRVCGYVSVEIELTTLISAHEIALFGEPRGRRIK ECCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEECEEEEEEEECCCCCEEE YGEGQWFAVPLPDGGYGLGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPADAVLV ECCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCEEEE AWFLDDGISWGQWPLIPSTRPFRREEWPVPAFWRFEPGNLGKGWVVAYRQDDDGSKIPEQ EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCH QTYVDAKRAGRLPDDRVDSFAGIESRLETIFSDQERSLKKARRKPDAGAEG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TEKKTRRKHIRYAEGQWFAVPLKDGGYALGIIVRGSSKTRGGLGYFFGPRYPDVPDEDE CCHHHHHHHCEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCH TWRKQPAEAILIARFGDLGIIRGQWPLIASTRPFRREDWPVPKFHRVDALNPDKGWLVEY HHHHCCCCEEEEEEECCEEEEECCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEE HQDMNGFAPPERETYTDTKKIAHLPEDRVCGYVSVEIELTTLISAHEIALFGEPRGRRIK ECCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEEEECEEEEEEEECCCCCEEE YGEGQWFAVPLPDGGYGLGIIVRGSSKTRGGLGYFFGPRYPDVPDEDETWRKQPADAVLV ECCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCEEEE AWFLDDGISWGQWPLIPSTRPFRREEWPVPAFWRFEPGNLGKGWVVAYRQDDDGSKIPEQ EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCH QTYVDAKRAGRLPDDRVDSFAGIESRLETIFSDQERSLKKARRKPDAGAEG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA