Click here to switch to the map view.

The map label for this gene is 222527205

Identifier: 222527205

GI number: 222527205

Start: 4936729

End: 4937460

Strand: Direct

Name: 222527205

Synonym: Chy400_3989

Alternate gene names: NA

Gene position: 4936729-4937460 (Clockwise)

Preceding gene: 222527204

Following gene: 222527206

Centisome position: 93.69

GC content: 62.98

Gene sequence:

>732_bases
ATGTGGCGCAGCGCCGGCAGCGGCCCGGTCAACCCGCAGGACCTGAACCGCTATGCCTACGCGCTGAACAATCCGCTGAA
ATACACCGACCCGACGGGGCATTGGGTTGAGACGGCGTGGGACCTTGCCAATCTGGTCCTGAGCGCTGCTGCCGTCTGGC
AAAACCCCAGCGACCCCTGGAATTGGGCCGCACTCGCTGCCGACACCGCGTCCACCGTGCTGCCCGGCGTTCCTGGCGGC
GCGGGGGCGGTGATCCGCGGCGCGAAAGTTGCCAATGTCCTCTCCGATGCCGACCTCCTGCGCCAGGTGGGACGCGCCGT
TCCTTCAGGACGCGCCGTCACCTCCCTGAGCCAGGCGGCCCTGGCAACCATCCGGACATACGGCATCCAACCCTACGGTG
AGTTTGACCGTCCCCTGGCACCGTCGGGTACCGCCGTCCATCACCTGGTGGAGAAGCGGTTCTGGCAGCAACTAGGGTTC
ACGAGCCCGACAGAGGCTGAACAGCGGATCCTGGCAGTGCTCAGCCCACAGACGCTGCACGGCCCGGCCGGGAAAGGGAA
GCAGACGATAACGGATATGATCCGCGATCAGCTTCCGTATCAACCGAGCAACCCGCCATCAGCACAAAAAATCTGGGAGG
TGCATCGTAAGGTTTATGAACGGCTTGGATTTAACGATTGGGCACACCTGGTGTGGGAAGTATACTTCAAGCCACTCGGC
ATCTCGTATTAG

Upstream 100 bases:

>100_bases
ATACGACGATCCCGACATCGGGCGGTTTCTCTCCGCCGACACCATCATCCCCGCCAGCCCGCCGCTCACCGTCTGGCCGA
GCGATGCGACTGCGCAGGGG

Downstream 100 bases:

>100_bases
GAGCACGAGAGCATTGGCTGGAAGGGTGTAGCGAGGAGTAAAACGATGAAAGAAATCATCACGCTCGATGTGTCCTTTCC
CAAGGAAGAGGCGGCCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHWVETAWDLANLVLSAAAVWQNPSDPWNWAALAADTASTVLPGVPGG
AGAVIRGAKVANVLSDADLLRQVGRAVPSGRAVTSLSQAALATIRTYGIQPYGEFDRPLAPSGTAVHHLVEKRFWQQLGF
TSPTEAEQRILAVLSPQTLHGPAGKGKQTITDMIRDQLPYQPSNPPSAQKIWEVHRKVYERLGFNDWAHLVWEVYFKPLG
ISY

Sequences:

>Translated_243_residues
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHWVETAWDLANLVLSAAAVWQNPSDPWNWAALAADTASTVLPGVPGG
AGAVIRGAKVANVLSDADLLRQVGRAVPSGRAVTSLSQAALATIRTYGIQPYGEFDRPLAPSGTAVHHLVEKRFWQQLGF
TSPTEAEQRILAVLSPQTLHGPAGKGKQTITDMIRDQLPYQPSNPPSAQKIWEVHRKVYERLGFNDWAHLVWEVYFKPLG
ISY
>Mature_243_residues
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHWVETAWDLANLVLSAAAVWQNPSDPWNWAALAADTASTVLPGVPGG
AGAVIRGAKVANVLSDADLLRQVGRAVPSGRAVTSLSQAALATIRTYGIQPYGEFDRPLAPSGTAVHHLVEKRFWQQLGF
TSPTEAEQRILAVLSPQTLHGPAGKGKQTITDMIRDQLPYQPSNPPSAQKIWEVHRKVYERLGFNDWAHLVWEVYFKPLG
ISY

Specific function: Unknown

COG id: COG5529

COG function: function code R; Pyocin large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26603; Mature: 26603

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA