| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527198
Identifier: 222527198
GI number: 222527198
Start: 4929587
End: 4930144
Strand: Direct
Name: 222527198
Synonym: Chy400_3980
Alternate gene names: NA
Gene position: 4929587-4930144 (Clockwise)
Preceding gene: 222527197
Following gene: 222527199
Centisome position: 93.56
GC content: 55.91
Gene sequence:
>558_bases GTGAGCTGCCTGCTCTTCGCCGTCGCTGTGGCGGCGGGTGGTATCATCATCAGCGAAAGCATCCGCCACGCGACAACTGA TGGTCAGGGACCGCGGCTGCCCCCGTTCAGCACGGATACTGGCGGGCAACCGGCGGATCCGGGTGGGTTGGAGCCCCAGG ATTCGCATCAGCCACCTGAACCCGCTGGTCGGGAAGCACGAGCAATCTATGAGACAGCACGTCGTGTCAACTACCGTGGC ACCTATTTTGCACACCACCCCCGTCTTCGCCCATTCAGCGAACACATTGTGGTACATCATCGGATACCATTGGATGTCTT GTTACGACGACCAGGTCTGTTTACCGCCGAAGAGTTGAATGCTGCCACCAAGCTCAGAGGTATTCCTGTACGTGAGCATT CTCATCTCCACTTGTCTGTCATCCATCGCAACTTGTGGGACAAGTTCTGGACGAATAATCCGCACGCAACTCGTGAGCAC ATCATCGCTTTCGCACGGAGCATTGATGAGCAGTATGATTTGCAAAACCTCGCGTACAAGGCATTCCTTCAGCCGTAA
Upstream 100 bases:
>100_bases CGCGTATGCGCTGAACAATCCGCTGACATACACCGACCCGACGGGGCATCATCCGTGTACACTGCTCGTTGCCGGCGGGC CGGTTGGCGCTACCGTTGCG
Downstream 100 bases:
>100_bases AGATAAAGCTTCTGTGCGTAATGTATACAAGAGACGCTTCAGGAGCACTAGTACAAATATGGGAGTAGGATCCCGATGAC CTCAACAACGCATGCCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSCLLFAVAVAAGGIIISESIRHATTDGQGPRLPPFSTDTGGQPADPGGLEPQDSHQPPEPAGREARAIYETARRVNYRG TYFAHHPRLRPFSEHIVVHHRIPLDVLLRRPGLFTAEELNAATKLRGIPVREHSHLHLSVIHRNLWDKFWTNNPHATREH IIAFARSIDEQYDLQNLAYKAFLQP
Sequences:
>Translated_185_residues MSCLLFAVAVAAGGIIISESIRHATTDGQGPRLPPFSTDTGGQPADPGGLEPQDSHQPPEPAGREARAIYETARRVNYRG TYFAHHPRLRPFSEHIVVHHRIPLDVLLRRPGLFTAEELNAATKLRGIPVREHSHLHLSVIHRNLWDKFWTNNPHATREH IIAFARSIDEQYDLQNLAYKAFLQP >Mature_184_residues SCLLFAVAVAAGGIIISESIRHATTDGQGPRLPPFSTDTGGQPADPGGLEPQDSHQPPEPAGREARAIYETARRVNYRGT YFAHHPRLRPFSEHIVVHHRIPLDVLLRRPGLFTAEELNAATKLRGIPVREHSHLHLSVIHRNLWDKFWTNNPHATREHI IAFARSIDEQYDLQNLAYKAFLQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20822; Mature: 20691
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCLLFAVAVAAGGIIISESIRHATTDGQGPRLPPFSTDTGGQPADPGGLEPQDSHQPPE CHHHHHHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGREARAIYETARRVNYRGTYFAHHPRLRPFSEHIVVHHRIPLDVLLRRPGLFTAEELN CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHH AATKLRGIPVREHSHLHLSVIHRNLWDKFWTNNPHATREHIIAFARSIDEQYDLQNLAYK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AFLQP HHCCC >Mature Secondary Structure SCLLFAVAVAAGGIIISESIRHATTDGQGPRLPPFSTDTGGQPADPGGLEPQDSHQPPE HHHHHHHHHHHCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGREARAIYETARRVNYRGTYFAHHPRLRPFSEHIVVHHRIPLDVLLRRPGLFTAEELN CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHH AATKLRGIPVREHSHLHLSVIHRNLWDKFWTNNPHATREHIIAFARSIDEQYDLQNLAYK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AFLQP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA